Brassica napus DNA markers linked to white rust resistance in Brassica juncea View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

2002-05

AUTHORS

D. Somers, G. Rakow, S. Rimmer

ABSTRACT

White rust, caused by Albugo candida, is an economically important disease of Brassica juncea mustard. The most efficient and cost effective way of protecting mustard plants from white rust is through genetic resistance. The development of canola quality B. juncea through interspecific crosses of B. juncea with Brassica napus has lead to the introgression of white rust resistance from B. napus into B. juncea. The objective of this study was to identify DNA markers for white rust resistance, derived from the introgressed B. napus chromosome segment, in a BC(3)F(2) population of condiment B. juncea mustard. This segregating population was phenotyped for white rust reaction and used to screen for AFLP markers associated with white rust resistance using bulked segregant analysis. Segregation data indicated that a single dominant gene controlled resistance to white rust. Eight AFLP markers linked to white rust resistance were identified, all derived from B. napus. The B. napus chromosome segment, carrying the white rust resistance gene ( Ac2V(1)), appeared to have recombined with the B. juncea DNA since recombinant individuals were identified. Comparative mapping of the eight B. napus-derived AFLP markers in a typical B. napus mapping population was inconclusive; therefore, the size of the introgressed B. napus fragment could not be determined. More... »

PAGES

1121-1124

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/s00122-001-0812-1

DOI

http://dx.doi.org/10.1007/s00122-001-0812-1

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1047908756

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/12582621


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Agriculture and Agriculture-Food Canada", 
          "id": "https://www.grid.ac/institutes/grid.55614.33", 
          "name": [
            "Cereal Research Centre, Agriculture and Agri-Food Canada, Winnipeg, MB, R3T 2M9, Canada"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Somers", 
        "givenName": "D.", 
        "id": "sg:person.01340726267.20", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01340726267.20"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Agriculture and Agriculture-Food Canada", 
          "id": "https://www.grid.ac/institutes/grid.55614.33", 
          "name": [
            "Saskatoon Research Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, S7N 0X2, Canada"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Rakow", 
        "givenName": "G.", 
        "id": "sg:person.0677403437.07", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0677403437.07"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Agriculture and Agriculture-Food Canada", 
          "id": "https://www.grid.ac/institutes/grid.55614.33", 
          "name": [
            "Saskatoon Research Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, S7N 0X2, Canada"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Rimmer", 
        "givenName": "S.", 
        "type": "Person"
      }
    ], 
    "datePublished": "2002-05", 
    "datePublishedReg": "2002-05-01", 
    "description": "White rust, caused by Albugo candida, is an economically important disease of Brassica juncea mustard. The most efficient and cost effective way of protecting mustard plants from white rust is through genetic resistance. The development of canola quality B. juncea through interspecific crosses of B. juncea with Brassica napus has lead to the introgression of white rust resistance from B. napus into B. juncea. The objective of this study was to identify DNA markers for white rust resistance, derived from the introgressed B. napus chromosome segment, in a BC(3)F(2) population of condiment B. juncea mustard. This segregating population was phenotyped for white rust reaction and used to screen for AFLP markers associated with white rust resistance using bulked segregant analysis. Segregation data indicated that a single dominant gene controlled resistance to white rust. Eight AFLP markers linked to white rust resistance were identified, all derived from B. napus. The B. napus chromosome segment, carrying the white rust resistance gene ( Ac2V(1)), appeared to have recombined with the B. juncea DNA since recombinant individuals were identified. Comparative mapping of the eight B. napus-derived AFLP markers in a typical B. napus mapping population was inconclusive; therefore, the size of the introgressed B. napus fragment could not be determined.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/s00122-001-0812-1", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1135804", 
        "issn": [
          "0040-5752", 
          "1432-2242"
        ], 
        "name": "Theoretical and Applied Genetics", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "6", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "104"
      }
    ], 
    "name": "Brassica napus DNA markers linked to white rust resistance in Brassica juncea", 
    "pagination": "1121-1124", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "e439ece5643e46beda6e0d4ce30847e64814d2b4ad86a90bcc9ce305f2190ac0"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "12582621"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "0145600"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/s00122-001-0812-1"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1047908756"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/s00122-001-0812-1", 
      "https://app.dimensions.ai/details/publication/pub.1047908756"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T14:28", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000373_0000000373/records_13078_00000001.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007/s00122-001-0812-1"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/s00122-001-0812-1'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/s00122-001-0812-1'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/s00122-001-0812-1'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/s00122-001-0812-1'


 

This table displays all metadata directly associated to this object as RDF triples.

83 TRIPLES      20 PREDICATES      29 URIs      21 LITERALS      9 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/s00122-001-0812-1 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N7d8d9818a40c4afcb7688515e8936ae6
4 schema:datePublished 2002-05
5 schema:datePublishedReg 2002-05-01
6 schema:description White rust, caused by Albugo candida, is an economically important disease of Brassica juncea mustard. The most efficient and cost effective way of protecting mustard plants from white rust is through genetic resistance. The development of canola quality B. juncea through interspecific crosses of B. juncea with Brassica napus has lead to the introgression of white rust resistance from B. napus into B. juncea. The objective of this study was to identify DNA markers for white rust resistance, derived from the introgressed B. napus chromosome segment, in a BC(3)F(2) population of condiment B. juncea mustard. This segregating population was phenotyped for white rust reaction and used to screen for AFLP markers associated with white rust resistance using bulked segregant analysis. Segregation data indicated that a single dominant gene controlled resistance to white rust. Eight AFLP markers linked to white rust resistance were identified, all derived from B. napus. The B. napus chromosome segment, carrying the white rust resistance gene ( Ac2V(1)), appeared to have recombined with the B. juncea DNA since recombinant individuals were identified. Comparative mapping of the eight B. napus-derived AFLP markers in a typical B. napus mapping population was inconclusive; therefore, the size of the introgressed B. napus fragment could not be determined.
7 schema:genre research_article
8 schema:inLanguage en
9 schema:isAccessibleForFree false
10 schema:isPartOf N6334f0c6184242a2b1d5286947dc020c
11 N82a82738fe5649f99997716165d7cac6
12 sg:journal.1135804
13 schema:name Brassica napus DNA markers linked to white rust resistance in Brassica juncea
14 schema:pagination 1121-1124
15 schema:productId N318d15f73c4b4a19ac0c9f94976478e5
16 Nb68a3841fed848ce88476cf8fac10cc7
17 Nbdafaea1ba504f438cda5b6b38bf0326
18 Nc2b95123506643358c1caf4b407e93a2
19 Nc3ba1d659db7483da7fba2d274157577
20 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047908756
21 https://doi.org/10.1007/s00122-001-0812-1
22 schema:sdDatePublished 2019-04-11T14:28
23 schema:sdLicense https://scigraph.springernature.com/explorer/license/
24 schema:sdPublisher Nc3f66fc3f81a444a9b885fddeeb7627f
25 schema:url http://link.springer.com/10.1007/s00122-001-0812-1
26 sgo:license sg:explorer/license/
27 sgo:sdDataset articles
28 rdf:type schema:ScholarlyArticle
29 N318d15f73c4b4a19ac0c9f94976478e5 schema:name dimensions_id
30 schema:value pub.1047908756
31 rdf:type schema:PropertyValue
32 N6334f0c6184242a2b1d5286947dc020c schema:volumeNumber 104
33 rdf:type schema:PublicationVolume
34 N7d8d9818a40c4afcb7688515e8936ae6 rdf:first sg:person.01340726267.20
35 rdf:rest N8a6ee641878e4d1d824bf348df417c71
36 N82a82738fe5649f99997716165d7cac6 schema:issueNumber 6
37 rdf:type schema:PublicationIssue
38 N8a6ee641878e4d1d824bf348df417c71 rdf:first sg:person.0677403437.07
39 rdf:rest Ndc82b1d8ebcd45b6b7ed7d00dac75048
40 Nb605491f770f404abfde2e178ec5a9ea schema:affiliation https://www.grid.ac/institutes/grid.55614.33
41 schema:familyName Rimmer
42 schema:givenName S.
43 rdf:type schema:Person
44 Nb68a3841fed848ce88476cf8fac10cc7 schema:name doi
45 schema:value 10.1007/s00122-001-0812-1
46 rdf:type schema:PropertyValue
47 Nbdafaea1ba504f438cda5b6b38bf0326 schema:name pubmed_id
48 schema:value 12582621
49 rdf:type schema:PropertyValue
50 Nc2b95123506643358c1caf4b407e93a2 schema:name nlm_unique_id
51 schema:value 0145600
52 rdf:type schema:PropertyValue
53 Nc3ba1d659db7483da7fba2d274157577 schema:name readcube_id
54 schema:value e439ece5643e46beda6e0d4ce30847e64814d2b4ad86a90bcc9ce305f2190ac0
55 rdf:type schema:PropertyValue
56 Nc3f66fc3f81a444a9b885fddeeb7627f schema:name Springer Nature - SN SciGraph project
57 rdf:type schema:Organization
58 Ndc82b1d8ebcd45b6b7ed7d00dac75048 rdf:first Nb605491f770f404abfde2e178ec5a9ea
59 rdf:rest rdf:nil
60 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
61 schema:name Biological Sciences
62 rdf:type schema:DefinedTerm
63 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
64 schema:name Genetics
65 rdf:type schema:DefinedTerm
66 sg:journal.1135804 schema:issn 0040-5752
67 1432-2242
68 schema:name Theoretical and Applied Genetics
69 rdf:type schema:Periodical
70 sg:person.01340726267.20 schema:affiliation https://www.grid.ac/institutes/grid.55614.33
71 schema:familyName Somers
72 schema:givenName D.
73 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01340726267.20
74 rdf:type schema:Person
75 sg:person.0677403437.07 schema:affiliation https://www.grid.ac/institutes/grid.55614.33
76 schema:familyName Rakow
77 schema:givenName G.
78 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0677403437.07
79 rdf:type schema:Person
80 https://www.grid.ac/institutes/grid.55614.33 schema:alternateName Agriculture and Agriculture-Food Canada
81 schema:name Cereal Research Centre, Agriculture and Agri-Food Canada, Winnipeg, MB, R3T 2M9, Canada
82 Saskatoon Research Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, S7N 0X2, Canada
83 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...