Determination and correlation of heavy atom positions in the derivatives used in the X-ray analysis of ribonuclease A at 2.5 ... View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1994-01

AUTHORS

C. H. Carlisle, R. A. Palmer, S. K. Mazumdar

ABSTRACT

The analysis of four heavy atom derivatives of ribonuclease A is described leading to isomorphous phasing at 2.5 Å resolution. Differences in the characteristics of the derivatives are discussed with respect to the determination of their heavy atom parameters and the correlation of sites between derivatives to produce a self consistent set. The criteria used to ensure consistency are described. In the final phase analysis using refined heavy atom parameters the least squaresR factors of the derivatives were .124, .143, .101, and .067 respectively, and the mean figure of merit for the 3444 observed reflexions was 0.66. More... »

PAGES

37-49

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/bf01665344

DOI

http://dx.doi.org/10.1007/bf01665344

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1052357856


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0202", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Atomic, Molecular, Nuclear, Particle and Plasma Physics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/02", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Physical Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Birkbeck, University of London", 
          "id": "https://www.grid.ac/institutes/grid.88379.3d", 
          "name": [
            "Department of Crystallography, Birkbeck College, Malet Street, WC1E 7HX, London, England"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Carlisle", 
        "givenName": "C. H.", 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Birkbeck, University of London", 
          "id": "https://www.grid.ac/institutes/grid.88379.3d", 
          "name": [
            "Department of Crystallography, Birkbeck College, Malet Street, WC1E 7HX, London, England"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Palmer", 
        "givenName": "R. A.", 
        "id": "sg:person.01013714776.39", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01013714776.39"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Saha Institute of Nuclear Physics", 
          "id": "https://www.grid.ac/institutes/grid.473481.d", 
          "name": [
            "Saha Institute of Nuclear Physics, Calcutta, India"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Mazumdar", 
        "givenName": "S. K.", 
        "id": "sg:person.012114143465.91", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.012114143465.91"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1016/0022-2836(69)90274-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000278335"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1107/s0567739468000707", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006361149"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/213562a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007705398", 
          "https://doi.org/10.1038/213562a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1107/s0365110x59002274", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012863712"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/214234a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015604758", 
          "https://doi.org/10.1038/214234a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/214234a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015604758", 
          "https://doi.org/10.1038/214234a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1107/s0365110x63000840", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1023217254"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1107/s0567740871004783", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032262083"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1107/s0567740868003626", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1034650495"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/213862a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038405748", 
          "https://doi.org/10.1038/213862a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1098/rspa.1951.0137", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038526921"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0022-2836(74)90125-9", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041792061"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01197906", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043643032", 
          "https://doi.org/10.1007/bf01197906"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01197906", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043643032", 
          "https://doi.org/10.1007/bf01197906"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1107/s0365110x67003111", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049657158"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1107/s0365110x65000427", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050554802"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/213557a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052932299", 
          "https://doi.org/10.1038/213557a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1088/0950-7671/41/7/303", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1059106860"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1081095574", 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "1994-01", 
    "datePublishedReg": "1994-01-01", 
    "description": "The analysis of four heavy atom derivatives of ribonuclease A is described leading to isomorphous phasing at 2.5 \u00c5 resolution. Differences in the characteristics of the derivatives are discussed with respect to the determination of their heavy atom parameters and the correlation of sites between derivatives to produce a self consistent set. The criteria used to ensure consistency are described. In the final phase analysis using refined heavy atom parameters the least squaresR factors of the derivatives were .124, .143, .101, and .067 respectively, and the mean figure of merit for the 3444 observed reflexions was 0.66.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/bf01665344", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1093566", 
        "issn": [
          "1074-1542", 
          "1572-8854"
        ], 
        "name": "Journal of Chemical Crystallography", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "1", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "24"
      }
    ], 
    "name": "Determination and correlation of heavy atom positions in the derivatives used in the X-ray analysis of ribonuclease A at 2.5 \u00c5 resolution", 
    "pagination": "37-49", 
    "productId": [
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "f965cfa0fe0652ef9adf0dc9ba4c53b560f4567da04b7e06ec54f1842b9e408f"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/bf01665344"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1052357856"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/bf01665344", 
      "https://app.dimensions.ai/details/publication/pub.1052357856"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-11T09:10", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000338_0000000338/records_47967_00000001.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007/BF01665344"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/bf01665344'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/bf01665344'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/bf01665344'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/bf01665344'


 

This table displays all metadata directly associated to this object as RDF triples.

132 TRIPLES      21 PREDICATES      44 URIs      19 LITERALS      7 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/bf01665344 schema:about anzsrc-for:02
2 anzsrc-for:0202
3 schema:author N02edcd3f232744bfbd181acb694390e4
4 schema:citation sg:pub.10.1007/bf01197906
5 sg:pub.10.1038/213557a0
6 sg:pub.10.1038/213562a0
7 sg:pub.10.1038/213862a0
8 sg:pub.10.1038/214234a0
9 https://app.dimensions.ai/details/publication/pub.1081095574
10 https://doi.org/10.1016/0022-2836(69)90274-5
11 https://doi.org/10.1016/0022-2836(74)90125-9
12 https://doi.org/10.1088/0950-7671/41/7/303
13 https://doi.org/10.1098/rspa.1951.0137
14 https://doi.org/10.1107/s0365110x59002274
15 https://doi.org/10.1107/s0365110x63000840
16 https://doi.org/10.1107/s0365110x65000427
17 https://doi.org/10.1107/s0365110x67003111
18 https://doi.org/10.1107/s0567739468000707
19 https://doi.org/10.1107/s0567740868003626
20 https://doi.org/10.1107/s0567740871004783
21 schema:datePublished 1994-01
22 schema:datePublishedReg 1994-01-01
23 schema:description The analysis of four heavy atom derivatives of ribonuclease A is described leading to isomorphous phasing at 2.5 Å resolution. Differences in the characteristics of the derivatives are discussed with respect to the determination of their heavy atom parameters and the correlation of sites between derivatives to produce a self consistent set. The criteria used to ensure consistency are described. In the final phase analysis using refined heavy atom parameters the least squaresR factors of the derivatives were .124, .143, .101, and .067 respectively, and the mean figure of merit for the 3444 observed reflexions was 0.66.
24 schema:genre research_article
25 schema:inLanguage en
26 schema:isAccessibleForFree false
27 schema:isPartOf N20226b42298046699b30450246e2c471
28 Nbfa88753850d4481822fdb87ba199395
29 sg:journal.1093566
30 schema:name Determination and correlation of heavy atom positions in the derivatives used in the X-ray analysis of ribonuclease A at 2.5 Å resolution
31 schema:pagination 37-49
32 schema:productId N67c9c625ae2b4cf7a020f0ff581c57cb
33 N7bd9ac3ebc104b0c9f973439014a44b4
34 N91bc8887598e42e3b10ce90a0317d7b5
35 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052357856
36 https://doi.org/10.1007/bf01665344
37 schema:sdDatePublished 2019-04-11T09:10
38 schema:sdLicense https://scigraph.springernature.com/explorer/license/
39 schema:sdPublisher N4a0098fa4f71441ea06a9e5a76127e78
40 schema:url http://link.springer.com/10.1007/BF01665344
41 sgo:license sg:explorer/license/
42 sgo:sdDataset articles
43 rdf:type schema:ScholarlyArticle
44 N02edcd3f232744bfbd181acb694390e4 rdf:first Nede95d6048184626a4d716b498560a22
45 rdf:rest Nfee9f5a8c3e045fcb1c72a38288d273e
46 N20226b42298046699b30450246e2c471 schema:issueNumber 1
47 rdf:type schema:PublicationIssue
48 N4a0098fa4f71441ea06a9e5a76127e78 schema:name Springer Nature - SN SciGraph project
49 rdf:type schema:Organization
50 N67c9c625ae2b4cf7a020f0ff581c57cb schema:name dimensions_id
51 schema:value pub.1052357856
52 rdf:type schema:PropertyValue
53 N7bd9ac3ebc104b0c9f973439014a44b4 schema:name doi
54 schema:value 10.1007/bf01665344
55 rdf:type schema:PropertyValue
56 N91bc8887598e42e3b10ce90a0317d7b5 schema:name readcube_id
57 schema:value f965cfa0fe0652ef9adf0dc9ba4c53b560f4567da04b7e06ec54f1842b9e408f
58 rdf:type schema:PropertyValue
59 Nbfa88753850d4481822fdb87ba199395 schema:volumeNumber 24
60 rdf:type schema:PublicationVolume
61 Nede95d6048184626a4d716b498560a22 schema:affiliation https://www.grid.ac/institutes/grid.88379.3d
62 schema:familyName Carlisle
63 schema:givenName C. H.
64 rdf:type schema:Person
65 Nf1d691643c124ed188c7d6a56ae02045 rdf:first sg:person.012114143465.91
66 rdf:rest rdf:nil
67 Nfee9f5a8c3e045fcb1c72a38288d273e rdf:first sg:person.01013714776.39
68 rdf:rest Nf1d691643c124ed188c7d6a56ae02045
69 anzsrc-for:02 schema:inDefinedTermSet anzsrc-for:
70 schema:name Physical Sciences
71 rdf:type schema:DefinedTerm
72 anzsrc-for:0202 schema:inDefinedTermSet anzsrc-for:
73 schema:name Atomic, Molecular, Nuclear, Particle and Plasma Physics
74 rdf:type schema:DefinedTerm
75 sg:journal.1093566 schema:issn 1074-1542
76 1572-8854
77 schema:name Journal of Chemical Crystallography
78 rdf:type schema:Periodical
79 sg:person.01013714776.39 schema:affiliation https://www.grid.ac/institutes/grid.88379.3d
80 schema:familyName Palmer
81 schema:givenName R. A.
82 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01013714776.39
83 rdf:type schema:Person
84 sg:person.012114143465.91 schema:affiliation https://www.grid.ac/institutes/grid.473481.d
85 schema:familyName Mazumdar
86 schema:givenName S. K.
87 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.012114143465.91
88 rdf:type schema:Person
89 sg:pub.10.1007/bf01197906 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043643032
90 https://doi.org/10.1007/bf01197906
91 rdf:type schema:CreativeWork
92 sg:pub.10.1038/213557a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052932299
93 https://doi.org/10.1038/213557a0
94 rdf:type schema:CreativeWork
95 sg:pub.10.1038/213562a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007705398
96 https://doi.org/10.1038/213562a0
97 rdf:type schema:CreativeWork
98 sg:pub.10.1038/213862a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038405748
99 https://doi.org/10.1038/213862a0
100 rdf:type schema:CreativeWork
101 sg:pub.10.1038/214234a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015604758
102 https://doi.org/10.1038/214234a0
103 rdf:type schema:CreativeWork
104 https://app.dimensions.ai/details/publication/pub.1081095574 schema:CreativeWork
105 https://doi.org/10.1016/0022-2836(69)90274-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000278335
106 rdf:type schema:CreativeWork
107 https://doi.org/10.1016/0022-2836(74)90125-9 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041792061
108 rdf:type schema:CreativeWork
109 https://doi.org/10.1088/0950-7671/41/7/303 schema:sameAs https://app.dimensions.ai/details/publication/pub.1059106860
110 rdf:type schema:CreativeWork
111 https://doi.org/10.1098/rspa.1951.0137 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038526921
112 rdf:type schema:CreativeWork
113 https://doi.org/10.1107/s0365110x59002274 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012863712
114 rdf:type schema:CreativeWork
115 https://doi.org/10.1107/s0365110x63000840 schema:sameAs https://app.dimensions.ai/details/publication/pub.1023217254
116 rdf:type schema:CreativeWork
117 https://doi.org/10.1107/s0365110x65000427 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050554802
118 rdf:type schema:CreativeWork
119 https://doi.org/10.1107/s0365110x67003111 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049657158
120 rdf:type schema:CreativeWork
121 https://doi.org/10.1107/s0567739468000707 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006361149
122 rdf:type schema:CreativeWork
123 https://doi.org/10.1107/s0567740868003626 schema:sameAs https://app.dimensions.ai/details/publication/pub.1034650495
124 rdf:type schema:CreativeWork
125 https://doi.org/10.1107/s0567740871004783 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032262083
126 rdf:type schema:CreativeWork
127 https://www.grid.ac/institutes/grid.473481.d schema:alternateName Saha Institute of Nuclear Physics
128 schema:name Saha Institute of Nuclear Physics, Calcutta, India
129 rdf:type schema:Organization
130 https://www.grid.ac/institutes/grid.88379.3d schema:alternateName Birkbeck, University of London
131 schema:name Department of Crystallography, Birkbeck College, Malet Street, WC1E 7HX, London, England
132 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...