Heliobacterium modesticaldum, sp. nov., a thermophilic heliobacterium of hot springs and volcanic soils View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1995-04

AUTHORS

Linda K. Kimble, Linda Mandelco, Carl R. Woese, Michael T. Madigan

ABSTRACT

Enrichment cultures for heliobacteria at 50°C yielded several strains of a thermophilic heliobacterium species from Yellowstone hot spring microbial mats and volcanic soils from Iceland. The novel organisms grew optimally above 50°C, contained bacteriochlorophyll g, and lacked intracytoplasmic membranes. All isolates were strict anaerobes and grew best as photoheterotrophs, although chemotrophic dark growth on pyruvate was also possible. These thermophilic heliobacteria were diazotrophic and fixed N2 up to their growth temperature limit of 56°C. Phylogenetic studies showed the new isolates to be specific relatives of Heliobacterium gestii and, as has been found in H. gestii, they produce heat-resistant endospores. The unique assemblage of properties found in these thermophilic heliobacteria implicate them as a new species of this group, and we describe them herein as a new species of the genus Heliobacterium, Heliobacterium modesticaldum. More... »

PAGES

259-267

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/bf00393378

DOI

http://dx.doi.org/10.1007/bf00393378

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1021995899


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0605", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Microbiology", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Department of Microbiology, Southern Illinois University, 62901-6508, Carbondale, IL, USA", 
          "id": "http://www.grid.ac/institutes/grid.411026.0", 
          "name": [
            "Department of Microbiology, Southern Illinois University, 62901-6508, Carbondale, IL, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Kimble", 
        "givenName": "Linda K.", 
        "id": "sg:person.011120306744.40", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.011120306744.40"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Microbiology, University of Illinois, 61801, Urbana, IL, USA", 
          "id": "http://www.grid.ac/institutes/grid.35403.31", 
          "name": [
            "Department of Microbiology, University of Illinois, 61801, Urbana, IL, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Mandelco", 
        "givenName": "Linda", 
        "id": "sg:person.01174524641.23", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01174524641.23"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Microbiology, University of Illinois, 61801, Urbana, IL, USA", 
          "id": "http://www.grid.ac/institutes/grid.35403.31", 
          "name": [
            "Department of Microbiology, University of Illinois, 61801, Urbana, IL, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Woese", 
        "givenName": "Carl R.", 
        "id": "sg:person.052006345.27", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.052006345.27"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Microbiology, Southern Illinois University, 62901-6508, Carbondale, IL, USA", 
          "id": "http://www.grid.ac/institutes/grid.411026.0", 
          "name": [
            "Department of Microbiology, Southern Illinois University, 62901-6508, Carbondale, IL, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Madigan", 
        "givenName": "Michael T.", 
        "id": "sg:person.01364153306.88", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01364153306.88"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1007/978-94-009-0511-5_842", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039014905", 
          "https://doi.org/10.1007/978-94-009-0511-5_842"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00039173", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005402640", 
          "https://doi.org/10.1007/bf00039173"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4612-6284-8", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1051754857", 
          "https://doi.org/10.1007/978-1-4612-6284-8"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00290810", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1035958325", 
          "https://doi.org/10.1007/bf00290810"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00393857", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052322965", 
          "https://doi.org/10.1007/bf00393857"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00410772", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007006765", 
          "https://doi.org/10.1007/bf00410772"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00402335", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1050814774", 
          "https://doi.org/10.1007/bf00402335"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00446302", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022989390", 
          "https://doi.org/10.1007/bf00446302"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00415603", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1041643983", 
          "https://doi.org/10.1007/bf00415603"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00415602", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052763974", 
          "https://doi.org/10.1007/bf00415602"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4613-1021-1_30", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040546043", 
          "https://doi.org/10.1007/978-1-4613-1021-1_30"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00290978", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1014590539", 
          "https://doi.org/10.1007/bf00290978"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "1995-04", 
    "datePublishedReg": "1995-04-01", 
    "description": "Enrichment cultures for heliobacteria at 50\u00b0C yielded several strains of a thermophilic heliobacterium species from Yellowstone hot spring microbial mats and volcanic soils from Iceland. The novel organisms grew optimally above 50\u00b0C, contained bacteriochlorophyll g, and lacked intracytoplasmic membranes. All isolates were strict anaerobes and grew best as photoheterotrophs, although chemotrophic dark growth on pyruvate was also possible. These thermophilic heliobacteria were diazotrophic and fixed N2 up to their growth temperature limit of 56\u00b0C. Phylogenetic studies showed the new isolates to be specific relatives of Heliobacterium gestii and, as has been found in H. gestii, they produce heat-resistant endospores. The unique assemblage of properties found in these thermophilic heliobacteria implicate them as a new species of this group, and we describe them herein as a new species of the genus Heliobacterium, Heliobacterium modesticaldum.", 
    "genre": "article", 
    "id": "sg:pub.10.1007/bf00393378", 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1018945", 
        "issn": [
          "0302-8933", 
          "1432-072X"
        ], 
        "name": "Archives of Microbiology", 
        "publisher": "Springer Nature", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "4", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "163"
      }
    ], 
    "keywords": [
      "new species", 
      "hot spring microbial mats", 
      "Heliobacterium modesticaldum", 
      "heat-resistant endospores", 
      "H. gestii", 
      "novel organisms", 
      "phylogenetic studies", 
      "microbial mats", 
      "intracytoplasmic membranes", 
      "unique assemblage", 
      "Heliobacterium gestii", 
      "dark growth", 
      "new isolates", 
      "strict anaerobes", 
      "heliobacteria", 
      "enrichment cultures", 
      "species", 
      "Heliobacterium", 
      "hot springs", 
      "specific relative", 
      "volcanic soils", 
      "photoheterotrophs", 
      "isolates", 
      "organisms", 
      "endospores", 
      "sp", 
      "soil", 
      "bacteriochlorophyll", 
      "assemblages", 
      "pyruvate", 
      "membrane", 
      "anaerobes", 
      "growth", 
      "strains", 
      "mats", 
      "relatives", 
      "spring", 
      "culture", 
      "temperature limit", 
      "Iceland", 
      "study", 
      "group", 
      "properties", 
      "N2", 
      "limit"
    ], 
    "name": "Heliobacterium modesticaldum, sp. nov., a thermophilic heliobacterium of hot springs and volcanic soils", 
    "pagination": "259-267", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1021995899"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/bf00393378"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/bf00393378", 
      "https://app.dimensions.ai/details/publication/pub.1021995899"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2022-08-04T16:52", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20220804/entities/gbq_results/article/article_299.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1007/bf00393378"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/bf00393378'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/bf00393378'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/bf00393378'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/bf00393378'


 

This table displays all metadata directly associated to this object as RDF triples.

174 TRIPLES      21 PREDICATES      82 URIs      62 LITERALS      6 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/bf00393378 schema:about anzsrc-for:06
2 anzsrc-for:0605
3 schema:author Nc124f4e401d14d17a6c08ffd160ed93b
4 schema:citation sg:pub.10.1007/978-1-4612-6284-8
5 sg:pub.10.1007/978-1-4613-1021-1_30
6 sg:pub.10.1007/978-94-009-0511-5_842
7 sg:pub.10.1007/bf00039173
8 sg:pub.10.1007/bf00290810
9 sg:pub.10.1007/bf00290978
10 sg:pub.10.1007/bf00393857
11 sg:pub.10.1007/bf00402335
12 sg:pub.10.1007/bf00410772
13 sg:pub.10.1007/bf00415602
14 sg:pub.10.1007/bf00415603
15 sg:pub.10.1007/bf00446302
16 schema:datePublished 1995-04
17 schema:datePublishedReg 1995-04-01
18 schema:description Enrichment cultures for heliobacteria at 50°C yielded several strains of a thermophilic heliobacterium species from Yellowstone hot spring microbial mats and volcanic soils from Iceland. The novel organisms grew optimally above 50°C, contained bacteriochlorophyll g, and lacked intracytoplasmic membranes. All isolates were strict anaerobes and grew best as photoheterotrophs, although chemotrophic dark growth on pyruvate was also possible. These thermophilic heliobacteria were diazotrophic and fixed N2 up to their growth temperature limit of 56°C. Phylogenetic studies showed the new isolates to be specific relatives of Heliobacterium gestii and, as has been found in H. gestii, they produce heat-resistant endospores. The unique assemblage of properties found in these thermophilic heliobacteria implicate them as a new species of this group, and we describe them herein as a new species of the genus Heliobacterium, Heliobacterium modesticaldum.
19 schema:genre article
20 schema:isAccessibleForFree false
21 schema:isPartOf Nb4896b4d699a49b3b21701f0cca14f6d
22 Nd9a3ed915ac74b6498729f8836a2503e
23 sg:journal.1018945
24 schema:keywords H. gestii
25 Heliobacterium
26 Heliobacterium gestii
27 Heliobacterium modesticaldum
28 Iceland
29 N2
30 anaerobes
31 assemblages
32 bacteriochlorophyll
33 culture
34 dark growth
35 endospores
36 enrichment cultures
37 group
38 growth
39 heat-resistant endospores
40 heliobacteria
41 hot spring microbial mats
42 hot springs
43 intracytoplasmic membranes
44 isolates
45 limit
46 mats
47 membrane
48 microbial mats
49 new isolates
50 new species
51 novel organisms
52 organisms
53 photoheterotrophs
54 phylogenetic studies
55 properties
56 pyruvate
57 relatives
58 soil
59 sp
60 species
61 specific relative
62 spring
63 strains
64 strict anaerobes
65 study
66 temperature limit
67 unique assemblage
68 volcanic soils
69 schema:name Heliobacterium modesticaldum, sp. nov., a thermophilic heliobacterium of hot springs and volcanic soils
70 schema:pagination 259-267
71 schema:productId N164f0b3df13842cc9e3e3b4e249c60aa
72 N36b21cb1d54b4cf9a83080a7daccd75c
73 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021995899
74 https://doi.org/10.1007/bf00393378
75 schema:sdDatePublished 2022-08-04T16:52
76 schema:sdLicense https://scigraph.springernature.com/explorer/license/
77 schema:sdPublisher N24e786c2765e467eb64ff136769a795e
78 schema:url https://doi.org/10.1007/bf00393378
79 sgo:license sg:explorer/license/
80 sgo:sdDataset articles
81 rdf:type schema:ScholarlyArticle
82 N164f0b3df13842cc9e3e3b4e249c60aa schema:name doi
83 schema:value 10.1007/bf00393378
84 rdf:type schema:PropertyValue
85 N24e786c2765e467eb64ff136769a795e schema:name Springer Nature - SN SciGraph project
86 rdf:type schema:Organization
87 N36b21cb1d54b4cf9a83080a7daccd75c schema:name dimensions_id
88 schema:value pub.1021995899
89 rdf:type schema:PropertyValue
90 N73d3d3d8bd2a458c82b311310fdfcd3d rdf:first sg:person.01364153306.88
91 rdf:rest rdf:nil
92 N7c249da7bdde407ab8cf1eed66fe5c5b rdf:first sg:person.01174524641.23
93 rdf:rest Na7b09ed445bb4c58a6c7842f05e31f14
94 Na7b09ed445bb4c58a6c7842f05e31f14 rdf:first sg:person.052006345.27
95 rdf:rest N73d3d3d8bd2a458c82b311310fdfcd3d
96 Nb4896b4d699a49b3b21701f0cca14f6d schema:issueNumber 4
97 rdf:type schema:PublicationIssue
98 Nc124f4e401d14d17a6c08ffd160ed93b rdf:first sg:person.011120306744.40
99 rdf:rest N7c249da7bdde407ab8cf1eed66fe5c5b
100 Nd9a3ed915ac74b6498729f8836a2503e schema:volumeNumber 163
101 rdf:type schema:PublicationVolume
102 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
103 schema:name Biological Sciences
104 rdf:type schema:DefinedTerm
105 anzsrc-for:0605 schema:inDefinedTermSet anzsrc-for:
106 schema:name Microbiology
107 rdf:type schema:DefinedTerm
108 sg:journal.1018945 schema:issn 0302-8933
109 1432-072X
110 schema:name Archives of Microbiology
111 schema:publisher Springer Nature
112 rdf:type schema:Periodical
113 sg:person.011120306744.40 schema:affiliation grid-institutes:grid.411026.0
114 schema:familyName Kimble
115 schema:givenName Linda K.
116 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.011120306744.40
117 rdf:type schema:Person
118 sg:person.01174524641.23 schema:affiliation grid-institutes:grid.35403.31
119 schema:familyName Mandelco
120 schema:givenName Linda
121 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01174524641.23
122 rdf:type schema:Person
123 sg:person.01364153306.88 schema:affiliation grid-institutes:grid.411026.0
124 schema:familyName Madigan
125 schema:givenName Michael T.
126 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01364153306.88
127 rdf:type schema:Person
128 sg:person.052006345.27 schema:affiliation grid-institutes:grid.35403.31
129 schema:familyName Woese
130 schema:givenName Carl R.
131 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.052006345.27
132 rdf:type schema:Person
133 sg:pub.10.1007/978-1-4612-6284-8 schema:sameAs https://app.dimensions.ai/details/publication/pub.1051754857
134 https://doi.org/10.1007/978-1-4612-6284-8
135 rdf:type schema:CreativeWork
136 sg:pub.10.1007/978-1-4613-1021-1_30 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040546043
137 https://doi.org/10.1007/978-1-4613-1021-1_30
138 rdf:type schema:CreativeWork
139 sg:pub.10.1007/978-94-009-0511-5_842 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039014905
140 https://doi.org/10.1007/978-94-009-0511-5_842
141 rdf:type schema:CreativeWork
142 sg:pub.10.1007/bf00039173 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005402640
143 https://doi.org/10.1007/bf00039173
144 rdf:type schema:CreativeWork
145 sg:pub.10.1007/bf00290810 schema:sameAs https://app.dimensions.ai/details/publication/pub.1035958325
146 https://doi.org/10.1007/bf00290810
147 rdf:type schema:CreativeWork
148 sg:pub.10.1007/bf00290978 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014590539
149 https://doi.org/10.1007/bf00290978
150 rdf:type schema:CreativeWork
151 sg:pub.10.1007/bf00393857 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052322965
152 https://doi.org/10.1007/bf00393857
153 rdf:type schema:CreativeWork
154 sg:pub.10.1007/bf00402335 schema:sameAs https://app.dimensions.ai/details/publication/pub.1050814774
155 https://doi.org/10.1007/bf00402335
156 rdf:type schema:CreativeWork
157 sg:pub.10.1007/bf00410772 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007006765
158 https://doi.org/10.1007/bf00410772
159 rdf:type schema:CreativeWork
160 sg:pub.10.1007/bf00415602 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052763974
161 https://doi.org/10.1007/bf00415602
162 rdf:type schema:CreativeWork
163 sg:pub.10.1007/bf00415603 schema:sameAs https://app.dimensions.ai/details/publication/pub.1041643983
164 https://doi.org/10.1007/bf00415603
165 rdf:type schema:CreativeWork
166 sg:pub.10.1007/bf00446302 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022989390
167 https://doi.org/10.1007/bf00446302
168 rdf:type schema:CreativeWork
169 grid-institutes:grid.35403.31 schema:alternateName Department of Microbiology, University of Illinois, 61801, Urbana, IL, USA
170 schema:name Department of Microbiology, University of Illinois, 61801, Urbana, IL, USA
171 rdf:type schema:Organization
172 grid-institutes:grid.411026.0 schema:alternateName Department of Microbiology, Southern Illinois University, 62901-6508, Carbondale, IL, USA
173 schema:name Department of Microbiology, Southern Illinois University, 62901-6508, Carbondale, IL, USA
174 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...