Ontology type: schema:ScholarlyArticle
1989-03
AUTHORSKlaus Steinmüller, Arthur C. Ley, Andre A. Steinmetz, Richard T. Sayre, Lawrence Bogorad
ABSTRACTThe ndhC and ORF159 genes of the maize plastid DNA (ptDNA) were sequenced and maize ORF159 was used to screen a library of genomic DNA of the blue-green alga Synechocystis sp. PCC 6803. The cyanobacterial gene homologous to ORF159 (ORF157) was isolated and sequenced. In sequencing the region upstream of ORF157, reading frames with homology to the ndhC and psbG genes of maize ptDNA were identified. The ndhC and psbG genes overlap in the ptDNAs of maize, tobacco and Marchantia polymorpha, but are separated by a noncoding spacer in Synechocystis. Northern blot analysis showed that the ndhC, psbG and ORF157/159 genes are cotranscribed in maize and Synechocystis. The three genes occur in the same order in ptDNA of maize, tobacco, and M. polymorpha as in Synechocystis 6803. The amino acid sequences of the NDH-C, PSII-G and the ORF157/159 proteins deduced from the maize genes are 65%, 52% and 53% homologous to those of Synechocystis. However, the cyanobacterial and higher plant NDH-C protein sequences are only 23% homologous to the mitochondrial NDH-3 protein. Protein products of in vitro transcription/translation of the Synechocystis transcription unit had apparent molecular masses of 6 kDa (NDH-C), 25 kDa (PSII-G) and 22 kDa (ORF157) on lithium dodecyl sulfate (LDS) polyacrylamide gel electrophoresis. If these are components of an NADH dehydrogenase, cyanobacteria appear to resemble mitochondria more than they do Escherichia coli and Rhodopseudomonas capsulata with regard to this enzyme complex. More... »
PAGES60-69
http://scigraph.springernature.com/pub.10.1007/bf00332231
DOIhttp://dx.doi.org/10.1007/bf00332231
DIMENSIONShttps://app.dimensions.ai/details/publication/pub.1004764877
PUBMEDhttps://www.ncbi.nlm.nih.gov/pubmed/2499764
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Genetics",
"type": "DefinedTerm"
},
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"name": "Biological Sciences",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Amino Acid Sequence",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Base Sequence",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Chromosome Mapping",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Cyanobacteria",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "DNA",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Molecular Sequence Data",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Multigene Family",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Operon",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Plants",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Protein Biosynthesis",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Transcription, Genetic",
"type": "DefinedTerm"
},
{
"inDefinedTermSet": "https://www.nlm.nih.gov/mesh/",
"name": "Zea mays",
"type": "DefinedTerm"
}
],
"author": [
{
"affiliation": {
"alternateName": "Harvard University",
"id": "https://www.grid.ac/institutes/grid.38142.3c",
"name": [
"The Biological Laboratories, Harvard University, 16 Divinity Avenue, 02138, Cambridge, MA, USA"
],
"type": "Organization"
},
"familyName": "Steinm\u00fcller",
"givenName": "Klaus",
"id": "sg:person.01061567666.47",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01061567666.47"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Harvard University",
"id": "https://www.grid.ac/institutes/grid.38142.3c",
"name": [
"The Biological Laboratories, Harvard University, 16 Divinity Avenue, 02138, Cambridge, MA, USA"
],
"type": "Organization"
},
"familyName": "Ley",
"givenName": "Arthur C.",
"id": "sg:person.01206432267.41",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01206432267.41"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Harvard University",
"id": "https://www.grid.ac/institutes/grid.38142.3c",
"name": [
"The Biological Laboratories, Harvard University, 16 Divinity Avenue, 02138, Cambridge, MA, USA"
],
"type": "Organization"
},
"familyName": "Steinmetz",
"givenName": "Andre A.",
"id": "sg:person.01114712662.29",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01114712662.29"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Harvard University",
"id": "https://www.grid.ac/institutes/grid.38142.3c",
"name": [
"The Biological Laboratories, Harvard University, 16 Divinity Avenue, 02138, Cambridge, MA, USA"
],
"type": "Organization"
},
"familyName": "Sayre",
"givenName": "Richard T.",
"id": "sg:person.0610314665.35",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.0610314665.35"
],
"type": "Person"
},
{
"affiliation": {
"alternateName": "Harvard University",
"id": "https://www.grid.ac/institutes/grid.38142.3c",
"name": [
"The Biological Laboratories, Harvard University, 16 Divinity Avenue, 02138, Cambridge, MA, USA"
],
"type": "Organization"
},
"familyName": "Bogorad",
"givenName": "Lawrence",
"id": "sg:person.01154236031.60",
"sameAs": [
"https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01154236031.60"
],
"type": "Person"
}
],
"citation": [
{
"id": "https://doi.org/10.1016/b978-0-12-152515-6.50005-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1002987942"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf01578513",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1003952029",
"https://doi.org/10.1007/bf01578513"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf01578513",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1003952029",
"https://doi.org/10.1007/bf01578513"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00015877",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1005726338",
"https://doi.org/10.1007/bf00015877"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00015877",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1005726338",
"https://doi.org/10.1007/bf00015877"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/0168-9452(86)90176-7",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1005818987"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00427200",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1006887885",
"https://doi.org/10.1007/bf00427200"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00427200",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1006887885",
"https://doi.org/10.1007/bf00427200"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0076-6879(80)65059-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1008420927"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.75.7.3060",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1008985934"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/227680a0",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1010419937",
"https://doi.org/10.1038/227680a0"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/978-1-4684-4604-3_1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1011676338",
"https://doi.org/10.1007/978-1-4684-4604-3_1"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/15.9.3922",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1014328538"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1146/annurev.ge.19.120185.001545",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1017300352"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1432-1033.1988.tb13824.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1017471556"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/10.16.4985",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1019683916"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.79.20.6260",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1020652067"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00420729",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1023650713",
"https://doi.org/10.1007/bf00420729"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00420729",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1023650713",
"https://doi.org/10.1007/bf00420729"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1432-1033.1984.tb08407.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1023887424"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.74.12.5463",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025360556"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1432-1033.1981.tb05328.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1025900168"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.81.9.2693",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1026886199"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/15.9.3932",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1029958904"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/322572a0",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1033223243",
"https://doi.org/10.1038/322572a0"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.79.14.4342",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1035059649"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/0003-2697(81)90296-7",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1036214047"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1093/nar/12.10.4411",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1036473336"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.79.14.4352",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1037759899"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1038/290457a0",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1038487698",
"https://doi.org/10.1038/290457a0"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.78.6.3423",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1043432465"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/0378-1119(86)90038-7",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1043588617"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/0378-1119(86)90038-7",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1043588617"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1016/s0022-2836(83)80190-9",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1045066307"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.80.18.5535",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1045223383"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1073/pnas.71.4.1342",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1048283731"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00327187",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1048729049",
"https://doi.org/10.1007/bf00327187"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/bf00327187",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1048729049",
"https://doi.org/10.1007/bf00327187"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/978-1-4684-4538-1_18",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1050062369",
"https://doi.org/10.1007/978-1-4684-4538-1_18"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1146/annurev.pp.38.060187.002135",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1050749233"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1111/j.1432-1033.1974.tb03599.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1052877810"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1021/bi00510a047",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1055178757"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1126/science.1138359",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1062455188"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1128/jb.165.3.964-971.1986",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1062714796"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1128/jb.169.1.80-86.1987",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1062715462"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1002/j.1460-2075.1986.tb04464.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1077183847"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1002/j.1460-2075.1985.tb03894.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1079460536"
],
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1079794215",
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1079799801",
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1080011955",
"type": "CreativeWork"
},
{
"id": "https://app.dimensions.ai/details/publication/pub.1081937887",
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1002/j.1537-2197.1955.tb11120.x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1100707658"
],
"type": "CreativeWork"
},
{
"id": "https://doi.org/10.1515/znc-1981-5-610",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1104150742"
],
"type": "CreativeWork"
}
],
"datePublished": "1989-03",
"datePublishedReg": "1989-03-01",
"description": "The ndhC and ORF159 genes of the maize plastid DNA (ptDNA) were sequenced and maize ORF159 was used to screen a library of genomic DNA of the blue-green alga Synechocystis sp. PCC 6803. The cyanobacterial gene homologous to ORF159 (ORF157) was isolated and sequenced. In sequencing the region upstream of ORF157, reading frames with homology to the ndhC and psbG genes of maize ptDNA were identified. The ndhC and psbG genes overlap in the ptDNAs of maize, tobacco and Marchantia polymorpha, but are separated by a noncoding spacer in Synechocystis. Northern blot analysis showed that the ndhC, psbG and ORF157/159 genes are cotranscribed in maize and Synechocystis. The three genes occur in the same order in ptDNA of maize, tobacco, and M. polymorpha as in Synechocystis 6803. The amino acid sequences of the NDH-C, PSII-G and the ORF157/159 proteins deduced from the maize genes are 65%, 52% and 53% homologous to those of Synechocystis. However, the cyanobacterial and higher plant NDH-C protein sequences are only 23% homologous to the mitochondrial NDH-3 protein. Protein products of in vitro transcription/translation of the Synechocystis transcription unit had apparent molecular masses of 6 kDa (NDH-C), 25 kDa (PSII-G) and 22 kDa (ORF157) on lithium dodecyl sulfate (LDS) polyacrylamide gel electrophoresis. If these are components of an NADH dehydrogenase, cyanobacteria appear to resemble mitochondria more than they do Escherichia coli and Rhodopseudomonas capsulata with regard to this enzyme complex.",
"genre": "research_article",
"id": "sg:pub.10.1007/bf00332231",
"inLanguage": [
"en"
],
"isAccessibleForFree": false,
"isPartOf": [
{
"id": "sg:journal.1297380",
"issn": [
"1617-4615",
"1432-1874"
],
"name": "Molecular Genetics and Genomics",
"type": "Periodical"
},
{
"issueNumber": "1",
"type": "PublicationIssue"
},
{
"type": "PublicationVolume",
"volumeNumber": "216"
}
],
"name": "Characterization of the ndhC-psbG-ORF157/159 operon of maize plastid DNA and of the cyanobacterium Synechocystis sp. PCC6803",
"pagination": "60-69",
"productId": [
{
"name": "doi",
"type": "PropertyValue",
"value": [
"10.1007/bf00332231"
]
},
{
"name": "readcube_id",
"type": "PropertyValue",
"value": [
"16b444e309063c0709b2a765bda0f89a3aa1aa044ead3a6468438f36d5f06aae"
]
},
{
"name": "dimensions_id",
"type": "PropertyValue",
"value": [
"pub.1004764877"
]
},
{
"name": "nlm_unique_id",
"type": "PropertyValue",
"value": [
"0125036"
]
},
{
"name": "pubmed_id",
"type": "PropertyValue",
"value": [
"2499764"
]
}
],
"sameAs": [
"https://doi.org/10.1007/bf00332231",
"https://app.dimensions.ai/details/publication/pub.1004764877"
],
"sdDataset": "articles",
"sdDatePublished": "2019-04-15T08:48",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000374_0000000374/records_119717_00000000.jsonl",
"type": "ScholarlyArticle",
"url": "http://link.springer.com/10.1007/BF00332231"
}
]
Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/bf00332231'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/bf00332231'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/bf00332231'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/bf00332231'
This table displays all metadata directly associated to this object as RDF triples.
292 TRIPLES
21 PREDICATES
88 URIs
33 LITERALS
21 BLANK NODES