Transposition of TnA does not generate deletions View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1977-01

AUTHORS

Peter M. Bennett, John Grinsted, Mark H. Richmond

ABSTRACT

We have examined the incidence of loss of the TnA unit, Tn801, from RP1 under conditions where transposition of Tn801 to another replicon, R388, was readily detected. We found that the frequency of transposition of Tn801 from RP1 to R388 exceeded, by at least a factor of one hundred, the frequency at which it was deleted from RP1. We conclude that, in general, transposition of Tn801 does not generate derivatives of the donor plasmid which specifically lack Tn801. The relevance of these findings to the mechanism of transposition is discussed. More... »

PAGES

205-211

References to SciGraph publications

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/bf00330839

DOI

http://dx.doi.org/10.1007/bf00330839

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1008882945

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/331086


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0607", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Plant Biology", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Chromosome Aberrations", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Chromosome Deletion", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "DNA Replication", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "DNA, Bacterial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Drug Resistance, Microbial", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Escherichia coli", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Extrachromosomal Inheritance", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Models, Biological", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Plasmids", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Recombination, Genetic", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Transduction, Genetic", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Transformation, Genetic", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "Department of Bacteriology, University of Bristol, University Walk, BS8 1TD, Bristol, England", 
          "id": "http://www.grid.ac/institutes/grid.5337.2", 
          "name": [
            "Department of Bacteriology, University of Bristol, University Walk, BS8 1TD, Bristol, England"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Bennett", 
        "givenName": "Peter M.", 
        "id": "sg:person.010123055412.91", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010123055412.91"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Bacteriology, University of Bristol, University Walk, BS8 1TD, Bristol, England", 
          "id": "http://www.grid.ac/institutes/grid.5337.2", 
          "name": [
            "Department of Bacteriology, University of Bristol, University Walk, BS8 1TD, Bristol, England"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Grinsted", 
        "givenName": "John", 
        "id": "sg:person.01060205543.61", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01060205543.61"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Department of Bacteriology, University of Bristol, University Walk, BS8 1TD, Bristol, England", 
          "id": "http://www.grid.ac/institutes/grid.5337.2", 
          "name": [
            "Department of Bacteriology, University of Bristol, University Walk, BS8 1TD, Bristol, England"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Richmond", 
        "givenName": "Mark H.", 
        "id": "sg:person.066543767.65", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.066543767.65"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1007/bf00268890", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039376130", 
          "https://doi.org/10.1007/bf00268890"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00433726", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1005450012", 
          "https://doi.org/10.1007/bf00433726"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00268889", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006763325", 
          "https://doi.org/10.1007/bf00268889"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00334236", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1052565245", 
          "https://doi.org/10.1007/bf00334236"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00268228", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010089129", 
          "https://doi.org/10.1007/bf00268228"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00332538", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1074705681", 
          "https://doi.org/10.1007/bf00332538"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00381825", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1009367721", 
          "https://doi.org/10.1007/bf00381825"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "1977-01", 
    "datePublishedReg": "1977-01-01", 
    "description": "We have examined the incidence of loss of the TnA unit, Tn801, from RP1 under conditions where transposition of Tn801 to another replicon, R388, was readily detected. We found that the frequency of transposition of Tn801 from RP1 to R388 exceeded, by at least a factor of one hundred, the frequency at which it was deleted from RP1. We conclude that, in general, transposition of Tn801 does not generate derivatives of the donor plasmid which specifically lack Tn801. The relevance of these findings to the mechanism of transposition is discussed.", 
    "genre": "article", 
    "id": "sg:pub.10.1007/bf00330839", 
    "isAccessibleForFree": false, 
    "isPartOf": [
      {
        "id": "sg:journal.1297380", 
        "issn": [
          "1617-4615", 
          "1432-1874"
        ], 
        "name": "Molecular Genetics and Genomics", 
        "publisher": "Springer Nature", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "2", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "154"
      }
    ], 
    "keywords": [
      "incidence of loss", 
      "transposition", 
      "incidence", 
      "RP1", 
      "Tn801", 
      "findings", 
      "frequency", 
      "factors", 
      "deletion", 
      "replicon", 
      "relevance", 
      "plasmid", 
      "loss", 
      "mechanism", 
      "units", 
      "TNA", 
      "R388", 
      "frequency of transposition", 
      "donor plasmid", 
      "conditions", 
      "derivatives", 
      "mechanism of transposition"
    ], 
    "name": "Transposition of TnA does not generate deletions", 
    "pagination": "205-211", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1008882945"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/bf00330839"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "331086"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/bf00330839", 
      "https://app.dimensions.ai/details/publication/pub.1008882945"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2022-08-04T16:49", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-springernature-scigraph/baseset/20220804/entities/gbq_results/article/article_134.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "https://doi.org/10.1007/bf00330839"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/bf00330839'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/bf00330839'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/bf00330839'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/bf00330839'


 

This table displays all metadata directly associated to this object as RDF triples.

177 TRIPLES      21 PREDICATES      68 URIs      52 LITERALS      19 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/bf00330839 schema:about N13008db955c8425fb2487dc3124da310
2 N1fc08e694b7742aaa7b319d7de6b22e5
3 N2281021df3ca4d37a17914a716a3de0e
4 N23b61e1899744bac99280de8204096b3
5 N2bcbef6a7cd045a5975534d28931c2a3
6 N6529939d36964b5eb445cbe2c8217a21
7 N862d6b7228214b9db6b92edfae57ecb8
8 Nb6f6f5e7d74c4e199edf8b896f4b2e96
9 Nc9ff9e82a6b24ced944400f688cf706a
10 Nd17c480d6e89405d8e593b126ea48add
11 Nefdaee9ac8eb4554944ec84effb75f31
12 Nf0843b925ead4243a2d9e8071341d44b
13 anzsrc-for:06
14 anzsrc-for:0604
15 anzsrc-for:0607
16 schema:author N9489501b196f45919a1cc05a9a2ceaa2
17 schema:citation sg:pub.10.1007/bf00268228
18 sg:pub.10.1007/bf00268889
19 sg:pub.10.1007/bf00268890
20 sg:pub.10.1007/bf00332538
21 sg:pub.10.1007/bf00334236
22 sg:pub.10.1007/bf00381825
23 sg:pub.10.1007/bf00433726
24 schema:datePublished 1977-01
25 schema:datePublishedReg 1977-01-01
26 schema:description We have examined the incidence of loss of the TnA unit, Tn801, from RP1 under conditions where transposition of Tn801 to another replicon, R388, was readily detected. We found that the frequency of transposition of Tn801 from RP1 to R388 exceeded, by at least a factor of one hundred, the frequency at which it was deleted from RP1. We conclude that, in general, transposition of Tn801 does not generate derivatives of the donor plasmid which specifically lack Tn801. The relevance of these findings to the mechanism of transposition is discussed.
27 schema:genre article
28 schema:isAccessibleForFree false
29 schema:isPartOf Nbcfbf76ec6734fc486f6ff9e03b84f80
30 Nd2ec343cc5f9459ea852bab1db14fb85
31 sg:journal.1297380
32 schema:keywords R388
33 RP1
34 TNA
35 Tn801
36 conditions
37 deletion
38 derivatives
39 donor plasmid
40 factors
41 findings
42 frequency
43 frequency of transposition
44 incidence
45 incidence of loss
46 loss
47 mechanism
48 mechanism of transposition
49 plasmid
50 relevance
51 replicon
52 transposition
53 units
54 schema:name Transposition of TnA does not generate deletions
55 schema:pagination 205-211
56 schema:productId N58bd3e2386b8468db0c1365ae14a8517
57 Nc254446f5002466c934ab44c579a51cd
58 Nff5d290724ca4928ad84c8feb8fcd16c
59 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008882945
60 https://doi.org/10.1007/bf00330839
61 schema:sdDatePublished 2022-08-04T16:49
62 schema:sdLicense https://scigraph.springernature.com/explorer/license/
63 schema:sdPublisher N5ebc78e91f4e4084a5e7bd2e2d623cde
64 schema:url https://doi.org/10.1007/bf00330839
65 sgo:license sg:explorer/license/
66 sgo:sdDataset articles
67 rdf:type schema:ScholarlyArticle
68 N13008db955c8425fb2487dc3124da310 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
69 schema:name Escherichia coli
70 rdf:type schema:DefinedTerm
71 N1fc08e694b7742aaa7b319d7de6b22e5 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
72 schema:name Plasmids
73 rdf:type schema:DefinedTerm
74 N2281021df3ca4d37a17914a716a3de0e schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
75 schema:name Transformation, Genetic
76 rdf:type schema:DefinedTerm
77 N23b61e1899744bac99280de8204096b3 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
78 schema:name Models, Biological
79 rdf:type schema:DefinedTerm
80 N2bcbef6a7cd045a5975534d28931c2a3 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
81 schema:name Extrachromosomal Inheritance
82 rdf:type schema:DefinedTerm
83 N58bd3e2386b8468db0c1365ae14a8517 schema:name pubmed_id
84 schema:value 331086
85 rdf:type schema:PropertyValue
86 N5ebc78e91f4e4084a5e7bd2e2d623cde schema:name Springer Nature - SN SciGraph project
87 rdf:type schema:Organization
88 N6529939d36964b5eb445cbe2c8217a21 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
89 schema:name Drug Resistance, Microbial
90 rdf:type schema:DefinedTerm
91 N7485db922add47a482a942549d895827 rdf:first sg:person.01060205543.61
92 rdf:rest N9b7b814f10be4f6c8ae35c21d03d535b
93 N862d6b7228214b9db6b92edfae57ecb8 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
94 schema:name Transduction, Genetic
95 rdf:type schema:DefinedTerm
96 N9489501b196f45919a1cc05a9a2ceaa2 rdf:first sg:person.010123055412.91
97 rdf:rest N7485db922add47a482a942549d895827
98 N9b7b814f10be4f6c8ae35c21d03d535b rdf:first sg:person.066543767.65
99 rdf:rest rdf:nil
100 Nb6f6f5e7d74c4e199edf8b896f4b2e96 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
101 schema:name Recombination, Genetic
102 rdf:type schema:DefinedTerm
103 Nbcfbf76ec6734fc486f6ff9e03b84f80 schema:issueNumber 2
104 rdf:type schema:PublicationIssue
105 Nc254446f5002466c934ab44c579a51cd schema:name doi
106 schema:value 10.1007/bf00330839
107 rdf:type schema:PropertyValue
108 Nc9ff9e82a6b24ced944400f688cf706a schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
109 schema:name DNA, Bacterial
110 rdf:type schema:DefinedTerm
111 Nd17c480d6e89405d8e593b126ea48add schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
112 schema:name Chromosome Aberrations
113 rdf:type schema:DefinedTerm
114 Nd2ec343cc5f9459ea852bab1db14fb85 schema:volumeNumber 154
115 rdf:type schema:PublicationVolume
116 Nefdaee9ac8eb4554944ec84effb75f31 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
117 schema:name Chromosome Deletion
118 rdf:type schema:DefinedTerm
119 Nf0843b925ead4243a2d9e8071341d44b schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
120 schema:name DNA Replication
121 rdf:type schema:DefinedTerm
122 Nff5d290724ca4928ad84c8feb8fcd16c schema:name dimensions_id
123 schema:value pub.1008882945
124 rdf:type schema:PropertyValue
125 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
126 schema:name Biological Sciences
127 rdf:type schema:DefinedTerm
128 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
129 schema:name Genetics
130 rdf:type schema:DefinedTerm
131 anzsrc-for:0607 schema:inDefinedTermSet anzsrc-for:
132 schema:name Plant Biology
133 rdf:type schema:DefinedTerm
134 sg:journal.1297380 schema:issn 1432-1874
135 1617-4615
136 schema:name Molecular Genetics and Genomics
137 schema:publisher Springer Nature
138 rdf:type schema:Periodical
139 sg:person.010123055412.91 schema:affiliation grid-institutes:grid.5337.2
140 schema:familyName Bennett
141 schema:givenName Peter M.
142 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.010123055412.91
143 rdf:type schema:Person
144 sg:person.01060205543.61 schema:affiliation grid-institutes:grid.5337.2
145 schema:familyName Grinsted
146 schema:givenName John
147 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01060205543.61
148 rdf:type schema:Person
149 sg:person.066543767.65 schema:affiliation grid-institutes:grid.5337.2
150 schema:familyName Richmond
151 schema:givenName Mark H.
152 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.066543767.65
153 rdf:type schema:Person
154 sg:pub.10.1007/bf00268228 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010089129
155 https://doi.org/10.1007/bf00268228
156 rdf:type schema:CreativeWork
157 sg:pub.10.1007/bf00268889 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006763325
158 https://doi.org/10.1007/bf00268889
159 rdf:type schema:CreativeWork
160 sg:pub.10.1007/bf00268890 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039376130
161 https://doi.org/10.1007/bf00268890
162 rdf:type schema:CreativeWork
163 sg:pub.10.1007/bf00332538 schema:sameAs https://app.dimensions.ai/details/publication/pub.1074705681
164 https://doi.org/10.1007/bf00332538
165 rdf:type schema:CreativeWork
166 sg:pub.10.1007/bf00334236 schema:sameAs https://app.dimensions.ai/details/publication/pub.1052565245
167 https://doi.org/10.1007/bf00334236
168 rdf:type schema:CreativeWork
169 sg:pub.10.1007/bf00381825 schema:sameAs https://app.dimensions.ai/details/publication/pub.1009367721
170 https://doi.org/10.1007/bf00381825
171 rdf:type schema:CreativeWork
172 sg:pub.10.1007/bf00433726 schema:sameAs https://app.dimensions.ai/details/publication/pub.1005450012
173 https://doi.org/10.1007/bf00433726
174 rdf:type schema:CreativeWork
175 grid-institutes:grid.5337.2 schema:alternateName Department of Bacteriology, University of Bristol, University Walk, BS8 1TD, Bristol, England
176 schema:name Department of Bacteriology, University of Bristol, University Walk, BS8 1TD, Bristol, England
177 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...