Distribution of RNA editing sites in Oenothera mitochondrial mRNAs and rRNAs View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1991-11

AUTHORS

Wolfgang Schuster, Rainer Ternes, Volker Knoop, Rudolf Hiesel, Bernd Wissinger, Axel Brennicke

ABSTRACT

To investigate whether RNA editing in plant mitochondria modifies structural RNAs as well as protein-coding RNAs we compared the genomic-encoded information with the respective transcripts of several genes in Oenothera. The genes analysed are the 5S, 18S and 26 S rRNAs, the alpha-subunit of ATPase (atpA), cytochrome b (cytb), orfB, which is located upstream of cytochrome oxidase subunit III, and the respective leader, trailer and spacer sequences. All open reading frames were found to be edited to some degree. The atpA coding region has the least edited mRNA in Oenothera mitochondria, with only four nucleotides altered in the 1533 nucleotide open reading frame. From this analysis we conclude that frequent RNA editing is indicative of functional protein coding regions in plant mitochondria. The extensive editing in orfB, for example, suggests that this orf codes for a mitochondrial protein. No RNA editing event was found in the 5S rRNA or in the 1824 nucleotides analysed of the 18S rRNA, but two nucleotides were found to be altered in the 1970 nucleotides compared for the 26S rRNA. One nucleotide alteration has changed C to U, the other in reverse U to C. However, only one of five cDNA clones covering this region shows the modifications, similar to many silent editing events in open reading frames. RNA editing in the structural RNAs thus does not seem to be essential for their function in the mitochondrial ribosome. More... »

PAGES

397-404

References to SciGraph publications

  • 1990-11. Cytochrome oxidase subunit II mRNAs in Oenothera mitochondria are edited at 24 sites in CURRENT GENETICS
  • 1988-04. The NADH-dehydrogenase subunit 5 gene in Oenothera mitochondria contains two introns and is co-transcribed with the 5 S rRNA gene in MOLECULAR GENETICS AND GENOMICS
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  • 1989-10. RNA editing in wheat mitochondria results in the conservation of protein sequences in NATURE
  • 1985-03. The 18S and 5S ribosomal RNA genes in Oenothera mitochondria: Sequence rearrangments in the 18S and 5S rRNA genes of higher plants in MOLECULAR GENETICS AND GENOMICS
  • 1985-02. TGA-Termination codon in the apocytochrome b gene from Oenothera mitochondria in CURRENT GENETICS
  • 1986-07. Pseudocopies of the ATPase α-subunit gene in Oenothera mitochondria are present on different circular molecules in MOLECULAR GENETICS AND GENOMICS
  • 1990-11. The cytochrome oxidase subunit III gene in sunflower mitochondria is cotranscribed with an open reading frame conserved in higher plants in CURRENT GENETICS
  • 1989-03. Conserved sequence elements at putative processing sites in plant mitochondria in CURRENT GENETICS
  • 1990-12. Species-specific RNA editing patterns in the mitochondrial rps13 transcripts of Oenothera and Daucus in MOLECULAR GENETICS AND GENOMICS
  • 1985-06. Primary and secondary structure of 26S ribosomal RNA of Oenothera mitochondria in CURRENT GENETICS
  • 1989-10. RNA editing in plant mitochondria in NATURE
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/bf00317068

    DOI

    http://dx.doi.org/10.1007/bf00317068

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1026824051

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/1725505


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    HOW TO GET THIS DATA PROGRAMMATICALLY:

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    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/bf00317068'


     

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