Comparison of RFLP and RAPD markers to estimating genetic relationships within and among cruciferous species View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1994-09

AUTHORS

C. E. Thormann, M. E. Ferreira, L. E. A. Camargo, J. G. Tivang, T. C. Osborn

ABSTRACT

Restriction fragment length polymorphism (RFLP) and random amplified polymorphic DNA (RAPD) markers are being used widely for evaluating genetic relationships of crop germplasm. Differences in the properties of these two markers could result in different estimates of genetic relationships among some accessions. Nuclear RFLP markers detected by genomic DNA and cDNA clones and RAPD markers were compared for evaluating genetic relationships among 18 accessions from six cultivated Brassica species and one accession from Raphanus sativus. Based on comparisons of genetic-similarity matrices and cophenetic values, RAPD markers were very similar to RFLP markers for estimating intraspecific genetic relationships; however, the two marker types gave different results for interspecific genetic relationships. The presence of amplified mitochondrial and chloroplast DNA fragments in the RAPD data set did not appear to account for differences in RAPD- and RFLP-based dendrograms. However, hybridization tests of RAPD fragments with similar molecular weights demonstrated that some fragments, scored as identical, were not homologous. In all these cases, the differences occurred at the interspecific level. Our results suggest that RAPD data may be less reliable than RFLP data when estimating genetic relationships of accessions from more than one species. More... »

PAGES

973-980

References to SciGraph publications

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/bf00220804

DOI

http://dx.doi.org/10.1007/bf00220804

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1021103909

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/24186250


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