Relative rates of nucleotide substitution at the rbcl locus of monocotyledonous plants View Full Text


Ontology type: schema:ScholarlyArticle     


Article Info

DATE

1992-10

AUTHORS

Brandon S. Gaut, Spencer V. Muse, W. Dennis Clark, Michael T. Clegg

ABSTRACT

We subjected 35 rbcL nucleotide sequences from monocotyledonous taxa to maximum likelihood relative rate tests and estimated relative differences in rates of nucleotide substitution between groups of sequences without relying on knowledge of divergence times between taxa. Rate tests revealed that there is a hierarchy of substitution rate at the rbcL locus within the monocots. Among the taxa analyzed the grasses have the most rapid substitution rate; they are followed in rate by the Orchidales, the Liliales, the Bromeliales, and the Arecales. The overall substitution rate for the rbcL locus of grasses is over 5 times the substitution rate in the rbcL of the palms. The substitution rate at the third codon positions in the rbcL of the grasses is over 8 times the third position rate in the palms. The pattern of rate variation is consistent with the generation-time-effect hypothesis. Heterogenous rates of substitution have important implications for phylogenetic reconstruction. More... »

PAGES

292-303

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/bf00161167

DOI

http://dx.doi.org/10.1007/bf00161167

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1014675398

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/1404415


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Genes, Plant", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Mathematics", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Mutation", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Phylogeny", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Plants", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Polymerase Chain Reaction", 
        "type": "DefinedTerm"
      }, 
      {
        "inDefinedTermSet": "https://www.nlm.nih.gov/mesh/", 
        "name": "Ribulose-Bisphosphate Carboxylase", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "University of California, Riverside", 
          "id": "https://www.grid.ac/institutes/grid.266097.c", 
          "name": [
            "Department of Botany and Plant Sciences, University of California, 92521, Riverside, Riverside, CA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Gaut", 
        "givenName": "Brandon S.", 
        "id": "sg:person.01122574547.04", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01122574547.04"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "North Carolina State University", 
          "id": "https://www.grid.ac/institutes/grid.40803.3f", 
          "name": [
            "Program in Statistical Genetics, North Carolina State University, 27695, Raleigh, NC, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Muse", 
        "givenName": "Spencer V.", 
        "id": "sg:person.01355712360.45", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01355712360.45"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Arizona State University", 
          "id": "https://www.grid.ac/institutes/grid.215654.1", 
          "name": [
            "Department of Botany, Arizona State University, 85287, Tempe, AZ, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Clark", 
        "givenName": "W. Dennis", 
        "id": "sg:person.015025563311.78", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015025563311.78"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of California, Riverside", 
          "id": "https://www.grid.ac/institutes/grid.266097.c", 
          "name": [
            "Department of Botany and Plant Sciences, University of California, 92521, Riverside, Riverside, CA, USA"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Clegg", 
        "givenName": "Michael T.", 
        "id": "sg:person.01146631174.19", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01146631174.19"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1093/nar/15.2.611", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002439438"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1266/jjg.62.375", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004712142"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.88.14.5974", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1008287659"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/288556a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010023964", 
          "https://doi.org/10.1038/288556a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02100082", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010774829", 
          "https://doi.org/10.1007/bf02100082"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02100082", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010774829", 
          "https://doi.org/10.1007/bf02100082"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.81.24.8009", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1015295563"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1015423945", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1015423945", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/10.16.4985", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1019683916"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02111276", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020308053", 
          "https://doi.org/10.1007/bf02111276"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02111276", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020308053", 
          "https://doi.org/10.1007/bf02111276"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/344656a0", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1020315510", 
          "https://doi.org/10.1038/344656a0"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.es.14.110183.001525", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021916699"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02603118", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022944083", 
          "https://doi.org/10.1007/bf02603118"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02603118", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1022944083", 
          "https://doi.org/10.1007/bf02603118"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.74.12.5463", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025360556"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.88.6.2060", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1025918281"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1139/g89-009", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026190512"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02100115", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026773907", 
          "https://doi.org/10.1007/bf02100115"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02100115", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026773907", 
          "https://doi.org/10.1007/bf02100115"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.es.14.110183.002003", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1026837656"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1071/bt9880067", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027057362"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.82.6.1741", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1027315234"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/b978-1-4832-2734-4.50017-6", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1032138540"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.87.12.4640", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1038402860"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1146/annurev.bi.46.070177.003041", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1042088378"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01734359", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044065382", 
          "https://doi.org/10.1007/bf01734359"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf01734359", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1044065382", 
          "https://doi.org/10.1007/bf01734359"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02101285", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045563541", 
          "https://doi.org/10.1007/bf02101285"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02101285", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1045563541", 
          "https://doi.org/10.1007/bf02101285"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02906502", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053233272", 
          "https://doi.org/10.1007/bf02906502"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf02906502", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1053233272", 
          "https://doi.org/10.1007/bf02906502"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/sqb.1987.052.01.092", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060405971"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/sqb.1987.052.01.093", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1060405972"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.3082006", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062588627"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2399941", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1069911044"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2412923", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1069921277"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2419059", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1069922478"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/3565569", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1070373125"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1076165212", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1077356149", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1077356342", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/oxfordjournals.molbev.a040605", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1077955830"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1078618783", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/oxfordjournals.molbev.a040382", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1079415829"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/oxfordjournals.molbev.a040572", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1083622080"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1111/j.1558-5646.1990.tb03828.x", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1085736141"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-1-4684-4988-4_1", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1089811828", 
          "https://doi.org/10.1007/978-1-4684-4988-4_1"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1017/cbo9780511623486", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1098709897"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "1992-10", 
    "datePublishedReg": "1992-10-01", 
    "description": "We subjected 35 rbcL nucleotide sequences from monocotyledonous taxa to maximum likelihood relative rate tests and estimated relative differences in rates of nucleotide substitution between groups of sequences without relying on knowledge of divergence times between taxa. Rate tests revealed that there is a hierarchy of substitution rate at the rbcL locus within the monocots. Among the taxa analyzed the grasses have the most rapid substitution rate; they are followed in rate by the Orchidales, the Liliales, the Bromeliales, and the Arecales. The overall substitution rate for the rbcL locus of grasses is over 5 times the substitution rate in the rbcL of the palms. The substitution rate at the third codon positions in the rbcL of the grasses is over 8 times the third position rate in the palms. The pattern of rate variation is consistent with the generation-time-effect hypothesis. Heterogenous rates of substitution have important implications for phylogenetic reconstruction.", 
    "genre": "research_article", 
    "id": "sg:pub.10.1007/bf00161167", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isFundedItemOf": [
      {
        "id": "sg:grant.2436354", 
        "type": "MonetaryGrant"
      }, 
      {
        "id": "sg:grant.2513351", 
        "type": "MonetaryGrant"
      }
    ], 
    "isPartOf": [
      {
        "id": "sg:journal.1016442", 
        "issn": [
          "0022-2844", 
          "1432-1432"
        ], 
        "name": "Journal of Molecular Evolution", 
        "type": "Periodical"
      }, 
      {
        "issueNumber": "4", 
        "type": "PublicationIssue"
      }, 
      {
        "type": "PublicationVolume", 
        "volumeNumber": "35"
      }
    ], 
    "name": "Relative rates of nucleotide substitution at the rbcl locus of monocotyledonous plants", 
    "pagination": "292-303", 
    "productId": [
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/bf00161167"
        ]
      }, 
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "45eac0f73bd4458b531de5c04fec528d9d3cb433bed5c840d212068deeb6cb3f"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1014675398"
        ]
      }, 
      {
        "name": "nlm_unique_id", 
        "type": "PropertyValue", 
        "value": [
          "0360051"
        ]
      }, 
      {
        "name": "pubmed_id", 
        "type": "PropertyValue", 
        "value": [
          "1404415"
        ]
      }
    ], 
    "sameAs": [
      "https://doi.org/10.1007/bf00161167", 
      "https://app.dimensions.ai/details/publication/pub.1014675398"
    ], 
    "sdDataset": "articles", 
    "sdDatePublished": "2019-04-15T08:54", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000374_0000000374/records_119754_00000000.jsonl", 
    "type": "ScholarlyArticle", 
    "url": "http://link.springer.com/10.1007/BF00161167"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/bf00161167'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/bf00161167'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/bf00161167'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/bf00161167'


 

This table displays all metadata directly associated to this object as RDF triples.

259 TRIPLES      21 PREDICATES      78 URIs      28 LITERALS      16 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/bf00161167 schema:about N1c73153654f246379e10effcbe9c3165
2 N3823c220073e421584f43352b0a6bb09
3 N3cb96d669f584d559414f6f92610680a
4 N65476414d2704965b0cc2903f0368cde
5 N950d9978165a4ef4b59aec5bf1006fe7
6 Nd1a837e250f940b79bef39747c6b8960
7 Nfa0dfb6a982c4ca3ab6c68cb2be96570
8 anzsrc-for:06
9 anzsrc-for:0604
10 schema:author N63e9f612ad8240efb0354d27d22d7f35
11 schema:citation sg:pub.10.1007/978-1-4684-4988-4_1
12 sg:pub.10.1007/bf01734359
13 sg:pub.10.1007/bf02100082
14 sg:pub.10.1007/bf02100115
15 sg:pub.10.1007/bf02101285
16 sg:pub.10.1007/bf02111276
17 sg:pub.10.1007/bf02603118
18 sg:pub.10.1007/bf02906502
19 sg:pub.10.1038/288556a0
20 sg:pub.10.1038/344656a0
21 https://app.dimensions.ai/details/publication/pub.1015423945
22 https://app.dimensions.ai/details/publication/pub.1076165212
23 https://app.dimensions.ai/details/publication/pub.1077356149
24 https://app.dimensions.ai/details/publication/pub.1077356342
25 https://app.dimensions.ai/details/publication/pub.1078618783
26 https://doi.org/10.1016/b978-1-4832-2734-4.50017-6
27 https://doi.org/10.1017/cbo9780511623486
28 https://doi.org/10.1071/bt9880067
29 https://doi.org/10.1073/pnas.74.12.5463
30 https://doi.org/10.1073/pnas.81.24.8009
31 https://doi.org/10.1073/pnas.82.6.1741
32 https://doi.org/10.1073/pnas.87.12.4640
33 https://doi.org/10.1073/pnas.88.14.5974
34 https://doi.org/10.1073/pnas.88.6.2060
35 https://doi.org/10.1093/nar/10.16.4985
36 https://doi.org/10.1093/nar/15.2.611
37 https://doi.org/10.1093/oxfordjournals.molbev.a040382
38 https://doi.org/10.1093/oxfordjournals.molbev.a040572
39 https://doi.org/10.1093/oxfordjournals.molbev.a040605
40 https://doi.org/10.1101/sqb.1987.052.01.092
41 https://doi.org/10.1101/sqb.1987.052.01.093
42 https://doi.org/10.1111/j.1558-5646.1990.tb03828.x
43 https://doi.org/10.1126/science.3082006
44 https://doi.org/10.1139/g89-009
45 https://doi.org/10.1146/annurev.bi.46.070177.003041
46 https://doi.org/10.1146/annurev.es.14.110183.001525
47 https://doi.org/10.1146/annurev.es.14.110183.002003
48 https://doi.org/10.1266/jjg.62.375
49 https://doi.org/10.2307/2399941
50 https://doi.org/10.2307/2412923
51 https://doi.org/10.2307/2419059
52 https://doi.org/10.2307/3565569
53 schema:datePublished 1992-10
54 schema:datePublishedReg 1992-10-01
55 schema:description We subjected 35 rbcL nucleotide sequences from monocotyledonous taxa to maximum likelihood relative rate tests and estimated relative differences in rates of nucleotide substitution between groups of sequences without relying on knowledge of divergence times between taxa. Rate tests revealed that there is a hierarchy of substitution rate at the rbcL locus within the monocots. Among the taxa analyzed the grasses have the most rapid substitution rate; they are followed in rate by the Orchidales, the Liliales, the Bromeliales, and the Arecales. The overall substitution rate for the rbcL locus of grasses is over 5 times the substitution rate in the rbcL of the palms. The substitution rate at the third codon positions in the rbcL of the grasses is over 8 times the third position rate in the palms. The pattern of rate variation is consistent with the generation-time-effect hypothesis. Heterogenous rates of substitution have important implications for phylogenetic reconstruction.
56 schema:genre research_article
57 schema:inLanguage en
58 schema:isAccessibleForFree false
59 schema:isPartOf N16884037d9d342c29729d8cc446aa4a1
60 N31e1993b655f4c9fa4b92afd2d70bec2
61 sg:journal.1016442
62 schema:name Relative rates of nucleotide substitution at the rbcl locus of monocotyledonous plants
63 schema:pagination 292-303
64 schema:productId N00477967a191454895daa23c4065348a
65 N5e1b2f197b104a43aa8e7c5f30fd3827
66 N7a067686da0d419ab5b0b1375cf56a58
67 Na5353537fcc54691bdf0bb46320c689f
68 Nd2f4773cf35e425ca079fc3d9c1c94f2
69 schema:sameAs https://app.dimensions.ai/details/publication/pub.1014675398
70 https://doi.org/10.1007/bf00161167
71 schema:sdDatePublished 2019-04-15T08:54
72 schema:sdLicense https://scigraph.springernature.com/explorer/license/
73 schema:sdPublisher N008ac1e4b3da4c2eb7edf14a9f5ab398
74 schema:url http://link.springer.com/10.1007/BF00161167
75 sgo:license sg:explorer/license/
76 sgo:sdDataset articles
77 rdf:type schema:ScholarlyArticle
78 N00477967a191454895daa23c4065348a schema:name pubmed_id
79 schema:value 1404415
80 rdf:type schema:PropertyValue
81 N008ac1e4b3da4c2eb7edf14a9f5ab398 schema:name Springer Nature - SN SciGraph project
82 rdf:type schema:Organization
83 N098e3e8ea0f546339f6cc729bfa6f860 rdf:first sg:person.01355712360.45
84 rdf:rest Na178f5856d334a5f90c2986bb61af546
85 N16884037d9d342c29729d8cc446aa4a1 schema:volumeNumber 35
86 rdf:type schema:PublicationVolume
87 N1c73153654f246379e10effcbe9c3165 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
88 schema:name Plants
89 rdf:type schema:DefinedTerm
90 N31e1993b655f4c9fa4b92afd2d70bec2 schema:issueNumber 4
91 rdf:type schema:PublicationIssue
92 N3823c220073e421584f43352b0a6bb09 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
93 schema:name Polymerase Chain Reaction
94 rdf:type schema:DefinedTerm
95 N3cb96d669f584d559414f6f92610680a schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
96 schema:name Mutation
97 rdf:type schema:DefinedTerm
98 N5e1b2f197b104a43aa8e7c5f30fd3827 schema:name readcube_id
99 schema:value 45eac0f73bd4458b531de5c04fec528d9d3cb433bed5c840d212068deeb6cb3f
100 rdf:type schema:PropertyValue
101 N63e9f612ad8240efb0354d27d22d7f35 rdf:first sg:person.01122574547.04
102 rdf:rest N098e3e8ea0f546339f6cc729bfa6f860
103 N65476414d2704965b0cc2903f0368cde schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
104 schema:name Phylogeny
105 rdf:type schema:DefinedTerm
106 N7a067686da0d419ab5b0b1375cf56a58 schema:name doi
107 schema:value 10.1007/bf00161167
108 rdf:type schema:PropertyValue
109 N9503152d625242b595fc2fd0ae1e5ab7 rdf:first sg:person.01146631174.19
110 rdf:rest rdf:nil
111 N950d9978165a4ef4b59aec5bf1006fe7 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
112 schema:name Mathematics
113 rdf:type schema:DefinedTerm
114 Na178f5856d334a5f90c2986bb61af546 rdf:first sg:person.015025563311.78
115 rdf:rest N9503152d625242b595fc2fd0ae1e5ab7
116 Na5353537fcc54691bdf0bb46320c689f schema:name nlm_unique_id
117 schema:value 0360051
118 rdf:type schema:PropertyValue
119 Nd1a837e250f940b79bef39747c6b8960 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
120 schema:name Ribulose-Bisphosphate Carboxylase
121 rdf:type schema:DefinedTerm
122 Nd2f4773cf35e425ca079fc3d9c1c94f2 schema:name dimensions_id
123 schema:value pub.1014675398
124 rdf:type schema:PropertyValue
125 Nfa0dfb6a982c4ca3ab6c68cb2be96570 schema:inDefinedTermSet https://www.nlm.nih.gov/mesh/
126 schema:name Genes, Plant
127 rdf:type schema:DefinedTerm
128 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
129 schema:name Biological Sciences
130 rdf:type schema:DefinedTerm
131 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
132 schema:name Genetics
133 rdf:type schema:DefinedTerm
134 sg:grant.2436354 http://pending.schema.org/fundedItem sg:pub.10.1007/bf00161167
135 rdf:type schema:MonetaryGrant
136 sg:grant.2513351 http://pending.schema.org/fundedItem sg:pub.10.1007/bf00161167
137 rdf:type schema:MonetaryGrant
138 sg:journal.1016442 schema:issn 0022-2844
139 1432-1432
140 schema:name Journal of Molecular Evolution
141 rdf:type schema:Periodical
142 sg:person.01122574547.04 schema:affiliation https://www.grid.ac/institutes/grid.266097.c
143 schema:familyName Gaut
144 schema:givenName Brandon S.
145 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01122574547.04
146 rdf:type schema:Person
147 sg:person.01146631174.19 schema:affiliation https://www.grid.ac/institutes/grid.266097.c
148 schema:familyName Clegg
149 schema:givenName Michael T.
150 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01146631174.19
151 rdf:type schema:Person
152 sg:person.01355712360.45 schema:affiliation https://www.grid.ac/institutes/grid.40803.3f
153 schema:familyName Muse
154 schema:givenName Spencer V.
155 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01355712360.45
156 rdf:type schema:Person
157 sg:person.015025563311.78 schema:affiliation https://www.grid.ac/institutes/grid.215654.1
158 schema:familyName Clark
159 schema:givenName W. Dennis
160 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.015025563311.78
161 rdf:type schema:Person
162 sg:pub.10.1007/978-1-4684-4988-4_1 schema:sameAs https://app.dimensions.ai/details/publication/pub.1089811828
163 https://doi.org/10.1007/978-1-4684-4988-4_1
164 rdf:type schema:CreativeWork
165 sg:pub.10.1007/bf01734359 schema:sameAs https://app.dimensions.ai/details/publication/pub.1044065382
166 https://doi.org/10.1007/bf01734359
167 rdf:type schema:CreativeWork
168 sg:pub.10.1007/bf02100082 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010774829
169 https://doi.org/10.1007/bf02100082
170 rdf:type schema:CreativeWork
171 sg:pub.10.1007/bf02100115 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026773907
172 https://doi.org/10.1007/bf02100115
173 rdf:type schema:CreativeWork
174 sg:pub.10.1007/bf02101285 schema:sameAs https://app.dimensions.ai/details/publication/pub.1045563541
175 https://doi.org/10.1007/bf02101285
176 rdf:type schema:CreativeWork
177 sg:pub.10.1007/bf02111276 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020308053
178 https://doi.org/10.1007/bf02111276
179 rdf:type schema:CreativeWork
180 sg:pub.10.1007/bf02603118 schema:sameAs https://app.dimensions.ai/details/publication/pub.1022944083
181 https://doi.org/10.1007/bf02603118
182 rdf:type schema:CreativeWork
183 sg:pub.10.1007/bf02906502 schema:sameAs https://app.dimensions.ai/details/publication/pub.1053233272
184 https://doi.org/10.1007/bf02906502
185 rdf:type schema:CreativeWork
186 sg:pub.10.1038/288556a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010023964
187 https://doi.org/10.1038/288556a0
188 rdf:type schema:CreativeWork
189 sg:pub.10.1038/344656a0 schema:sameAs https://app.dimensions.ai/details/publication/pub.1020315510
190 https://doi.org/10.1038/344656a0
191 rdf:type schema:CreativeWork
192 https://app.dimensions.ai/details/publication/pub.1015423945 schema:CreativeWork
193 https://app.dimensions.ai/details/publication/pub.1076165212 schema:CreativeWork
194 https://app.dimensions.ai/details/publication/pub.1077356149 schema:CreativeWork
195 https://app.dimensions.ai/details/publication/pub.1077356342 schema:CreativeWork
196 https://app.dimensions.ai/details/publication/pub.1078618783 schema:CreativeWork
197 https://doi.org/10.1016/b978-1-4832-2734-4.50017-6 schema:sameAs https://app.dimensions.ai/details/publication/pub.1032138540
198 rdf:type schema:CreativeWork
199 https://doi.org/10.1017/cbo9780511623486 schema:sameAs https://app.dimensions.ai/details/publication/pub.1098709897
200 rdf:type schema:CreativeWork
201 https://doi.org/10.1071/bt9880067 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027057362
202 rdf:type schema:CreativeWork
203 https://doi.org/10.1073/pnas.74.12.5463 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025360556
204 rdf:type schema:CreativeWork
205 https://doi.org/10.1073/pnas.81.24.8009 schema:sameAs https://app.dimensions.ai/details/publication/pub.1015295563
206 rdf:type schema:CreativeWork
207 https://doi.org/10.1073/pnas.82.6.1741 schema:sameAs https://app.dimensions.ai/details/publication/pub.1027315234
208 rdf:type schema:CreativeWork
209 https://doi.org/10.1073/pnas.87.12.4640 schema:sameAs https://app.dimensions.ai/details/publication/pub.1038402860
210 rdf:type schema:CreativeWork
211 https://doi.org/10.1073/pnas.88.14.5974 schema:sameAs https://app.dimensions.ai/details/publication/pub.1008287659
212 rdf:type schema:CreativeWork
213 https://doi.org/10.1073/pnas.88.6.2060 schema:sameAs https://app.dimensions.ai/details/publication/pub.1025918281
214 rdf:type schema:CreativeWork
215 https://doi.org/10.1093/nar/10.16.4985 schema:sameAs https://app.dimensions.ai/details/publication/pub.1019683916
216 rdf:type schema:CreativeWork
217 https://doi.org/10.1093/nar/15.2.611 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002439438
218 rdf:type schema:CreativeWork
219 https://doi.org/10.1093/oxfordjournals.molbev.a040382 schema:sameAs https://app.dimensions.ai/details/publication/pub.1079415829
220 rdf:type schema:CreativeWork
221 https://doi.org/10.1093/oxfordjournals.molbev.a040572 schema:sameAs https://app.dimensions.ai/details/publication/pub.1083622080
222 rdf:type schema:CreativeWork
223 https://doi.org/10.1093/oxfordjournals.molbev.a040605 schema:sameAs https://app.dimensions.ai/details/publication/pub.1077955830
224 rdf:type schema:CreativeWork
225 https://doi.org/10.1101/sqb.1987.052.01.092 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060405971
226 rdf:type schema:CreativeWork
227 https://doi.org/10.1101/sqb.1987.052.01.093 schema:sameAs https://app.dimensions.ai/details/publication/pub.1060405972
228 rdf:type schema:CreativeWork
229 https://doi.org/10.1111/j.1558-5646.1990.tb03828.x schema:sameAs https://app.dimensions.ai/details/publication/pub.1085736141
230 rdf:type schema:CreativeWork
231 https://doi.org/10.1126/science.3082006 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062588627
232 rdf:type schema:CreativeWork
233 https://doi.org/10.1139/g89-009 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026190512
234 rdf:type schema:CreativeWork
235 https://doi.org/10.1146/annurev.bi.46.070177.003041 schema:sameAs https://app.dimensions.ai/details/publication/pub.1042088378
236 rdf:type schema:CreativeWork
237 https://doi.org/10.1146/annurev.es.14.110183.001525 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021916699
238 rdf:type schema:CreativeWork
239 https://doi.org/10.1146/annurev.es.14.110183.002003 schema:sameAs https://app.dimensions.ai/details/publication/pub.1026837656
240 rdf:type schema:CreativeWork
241 https://doi.org/10.1266/jjg.62.375 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004712142
242 rdf:type schema:CreativeWork
243 https://doi.org/10.2307/2399941 schema:sameAs https://app.dimensions.ai/details/publication/pub.1069911044
244 rdf:type schema:CreativeWork
245 https://doi.org/10.2307/2412923 schema:sameAs https://app.dimensions.ai/details/publication/pub.1069921277
246 rdf:type schema:CreativeWork
247 https://doi.org/10.2307/2419059 schema:sameAs https://app.dimensions.ai/details/publication/pub.1069922478
248 rdf:type schema:CreativeWork
249 https://doi.org/10.2307/3565569 schema:sameAs https://app.dimensions.ai/details/publication/pub.1070373125
250 rdf:type schema:CreativeWork
251 https://www.grid.ac/institutes/grid.215654.1 schema:alternateName Arizona State University
252 schema:name Department of Botany, Arizona State University, 85287, Tempe, AZ, USA
253 rdf:type schema:Organization
254 https://www.grid.ac/institutes/grid.266097.c schema:alternateName University of California, Riverside
255 schema:name Department of Botany and Plant Sciences, University of California, 92521, Riverside, Riverside, CA, USA
256 rdf:type schema:Organization
257 https://www.grid.ac/institutes/grid.40803.3f schema:alternateName North Carolina State University
258 schema:name Program in Statistical Genetics, North Carolina State University, 27695, Raleigh, NC, USA
259 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...