Effects of Duplex Stability on Charge-Transfer Efficiency within DNA View Full Text


Ontology type: schema:Chapter     


Chapter Info

DATE

2004

AUTHORS

Thierry Douki , Jean-Luc Ravanat , Dimitar Angelov , J. Richard Wagner , Jean Cadet

ABSTRACT

In the first part of the chapter, emphasis is placed on the description of the main reactions of radical cations of the four predominant DNA purine and pyrimidine bases and minor 5-methylcytosine in aerated aqueous solutions. Information is also provided on the final one-electron oxidation products of 8-oxo-7,8-dihydroguanine, an ubiquitous decomposition product of DNA with most chemical and physical oxidizing agents, that exhibits a low ionization potential, and is therefore an excellent sink for positive hole migration within double-stranded DNA. In the second part of the review, it is shown that duplex stability plays a major role in the redistribution of positive holes generated by high intensity UV laser pulses on purine and pyrimidine bases towards guanine residues. These results were obtained by measurement of several oxidized nucleosides within DNA using a sensitive and accurate high performance liquid chromatography-tandem mass spectrometry assay. More... »

PAGES

1-25

Book

TITLE

Longe-Range Charge Transfer in DNA I

ISBN

978-3-540-20127-4
978-3-540-39880-6

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/b94409

DOI

http://dx.doi.org/10.1007/b94409

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1029186690


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0306", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Physical Chemistry (incl. Structural)", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/03", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Chemical Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "CEA Grenoble", 
          "id": "https://www.grid.ac/institutes/grid.457348.9", 
          "name": [
            "Laboratoire \u201cL\u00e9sions des Acides Nucl\u00e9iques\u201d, SCIB, D\u00e9partement de Recherche Fondamentale sur la Mati\u00e8re Condens\u00e9e, CEA/Grenoble, 38054\u00a0Grenoble Cedex 9, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Douki", 
        "givenName": "Thierry", 
        "id": "sg:person.01304317106.95", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01304317106.95"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "CEA Grenoble", 
          "id": "https://www.grid.ac/institutes/grid.457348.9", 
          "name": [
            "Laboratoire \u201cL\u00e9sions des Acides Nucl\u00e9iques\u201d, SCIB, D\u00e9partement de Recherche Fondamentale sur la Mati\u00e8re Condens\u00e9e, CEA/Grenoble, 38054\u00a0Grenoble Cedex 9, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Ravanat", 
        "givenName": "Jean-Luc", 
        "id": "sg:person.01173731606.43", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01173731606.43"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Georgi Nadjakov Institute of Solid State Physics", 
          "id": "https://www.grid.ac/institutes/grid.425129.9", 
          "name": [
            "Institute of Solid State Physics, Bulgarian Academy of Sciences, 1784\u00a0Sofia, Bulgaria"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Angelov", 
        "givenName": "Dimitar", 
        "id": "sg:person.01070504175.03", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01070504175.03"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "Universit\u00e9 de Sherbrooke", 
          "id": "https://www.grid.ac/institutes/grid.86715.3d", 
          "name": [
            "D\u00e9partement de M\u00e9decine Nucl\u00e9aire et Radiobiologie, Facult\u00e9 de m\u00e9decine, Universit\u00e9 de Sherbrooke, Sherbrooke, Qu\u00e9bec , J1H 5N4, Canada"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Wagner", 
        "givenName": "J. Richard", 
        "id": "sg:person.01037437036.28", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01037437036.28"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "CEA Grenoble", 
          "id": "https://www.grid.ac/institutes/grid.457348.9", 
          "name": [
            "Laboratoire \u201cL\u00e9sions des Acides Nucl\u00e9iques\u201d, SCIB, D\u00e9partement de Recherche Fondamentale sur la Mati\u00e8re Condens\u00e9e, CEA/Grenoble, 38054\u00a0Grenoble Cedex 9, France"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Cadet", 
        "givenName": "Jean", 
        "id": "sg:person.01324450712.56", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01324450712.56"
        ], 
        "type": "Person"
      }
    ], 
    "datePublished": "2004", 
    "datePublishedReg": "2004-01-01", 
    "description": "In the first part of the chapter, emphasis is placed on the description of the main reactions of radical cations of the four predominant DNA purine and pyrimidine bases and minor 5-methylcytosine in aerated aqueous solutions. Information is also provided on the final one-electron oxidation products of 8-oxo-7,8-dihydroguanine, an ubiquitous decomposition product of DNA with most chemical and physical oxidizing agents, that exhibits a low ionization potential, and is therefore an excellent sink for positive hole migration within double-stranded DNA. In the second part of the review, it is shown that duplex stability plays a major role in the redistribution of positive holes generated by high intensity UV laser pulses on purine and pyrimidine bases towards guanine residues. These results were obtained by measurement of several oxidized nucleosides within DNA using a sensitive and accurate high performance liquid chromatography-tandem mass spectrometry assay.", 
    "editor": [
      {
        "familyName": "Schuster", 
        "givenName": "G.B.", 
        "type": "Person"
      }
    ], 
    "genre": "chapter", 
    "id": "sg:pub.10.1007/b94409", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": {
      "isbn": [
        "978-3-540-20127-4", 
        "978-3-540-39880-6"
      ], 
      "name": "Longe-Range Charge Transfer in DNA I", 
      "type": "Book"
    }, 
    "name": "Effects of Duplex Stability on Charge-Transfer Efficiency within DNA", 
    "pagination": "1-25", 
    "productId": [
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/b94409"
        ]
      }, 
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "8b0abeb4108bdcd8249510d93a7d3a57b6eb3e474e80cab0d5fdde490de58ac6"
        ]
      }, 
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1029186690"
        ]
      }
    ], 
    "publisher": {
      "location": "Berlin, Heidelberg", 
      "name": "Springer Berlin Heidelberg", 
      "type": "Organisation"
    }, 
    "sameAs": [
      "https://doi.org/10.1007/b94409", 
      "https://app.dimensions.ai/details/publication/pub.1029186690"
    ], 
    "sdDataset": "chapters", 
    "sdDatePublished": "2019-04-15T16:04", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000001_0000000264/records_8675_00000050.jsonl", 
    "type": "Chapter", 
    "url": "http://link.springer.com/10.1007/b94409"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/b94409'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/b94409'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/b94409'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/b94409'


 

This table displays all metadata directly associated to this object as RDF triples.

99 TRIPLES      22 PREDICATES      27 URIs      20 LITERALS      8 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/b94409 schema:about anzsrc-for:03
2 anzsrc-for:0306
3 schema:author N71f4213c4e864829b9a04d1a01e78f0a
4 schema:datePublished 2004
5 schema:datePublishedReg 2004-01-01
6 schema:description In the first part of the chapter, emphasis is placed on the description of the main reactions of radical cations of the four predominant DNA purine and pyrimidine bases and minor 5-methylcytosine in aerated aqueous solutions. Information is also provided on the final one-electron oxidation products of 8-oxo-7,8-dihydroguanine, an ubiquitous decomposition product of DNA with most chemical and physical oxidizing agents, that exhibits a low ionization potential, and is therefore an excellent sink for positive hole migration within double-stranded DNA. In the second part of the review, it is shown that duplex stability plays a major role in the redistribution of positive holes generated by high intensity UV laser pulses on purine and pyrimidine bases towards guanine residues. These results were obtained by measurement of several oxidized nucleosides within DNA using a sensitive and accurate high performance liquid chromatography-tandem mass spectrometry assay.
7 schema:editor Nd617fe4928da451e85d473152c8321f3
8 schema:genre chapter
9 schema:inLanguage en
10 schema:isAccessibleForFree false
11 schema:isPartOf Ndd2976e0b4214213bd44ac9abfbc64ac
12 schema:name Effects of Duplex Stability on Charge-Transfer Efficiency within DNA
13 schema:pagination 1-25
14 schema:productId N7ee869cfbe2c4fa584788c30dfc8e8ee
15 N95fe1b9012da433bbc7954fc362f8bc4
16 Nef0f12a0ebd7455eb0c50b5cedd47733
17 schema:publisher N6c200db9262a402cb42b460680eaf3a6
18 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029186690
19 https://doi.org/10.1007/b94409
20 schema:sdDatePublished 2019-04-15T16:04
21 schema:sdLicense https://scigraph.springernature.com/explorer/license/
22 schema:sdPublisher N125df9118c574aeeaa69d351cbc0f6e3
23 schema:url http://link.springer.com/10.1007/b94409
24 sgo:license sg:explorer/license/
25 sgo:sdDataset chapters
26 rdf:type schema:Chapter
27 N09732b4070b94c6b80632782d95e8cf1 schema:familyName Schuster
28 schema:givenName G.B.
29 rdf:type schema:Person
30 N125df9118c574aeeaa69d351cbc0f6e3 schema:name Springer Nature - SN SciGraph project
31 rdf:type schema:Organization
32 N54fa5302172a4b118b0637274827dc7e rdf:first sg:person.01037437036.28
33 rdf:rest Naa9b7d78f2ea4384a3ab4af8b9e5685f
34 N6c200db9262a402cb42b460680eaf3a6 schema:location Berlin, Heidelberg
35 schema:name Springer Berlin Heidelberg
36 rdf:type schema:Organisation
37 N71f4213c4e864829b9a04d1a01e78f0a rdf:first sg:person.01304317106.95
38 rdf:rest Nb360c928d4b14e2f8ef45d8eaa225a19
39 N7ee869cfbe2c4fa584788c30dfc8e8ee schema:name doi
40 schema:value 10.1007/b94409
41 rdf:type schema:PropertyValue
42 N95fe1b9012da433bbc7954fc362f8bc4 schema:name readcube_id
43 schema:value 8b0abeb4108bdcd8249510d93a7d3a57b6eb3e474e80cab0d5fdde490de58ac6
44 rdf:type schema:PropertyValue
45 Naa9b7d78f2ea4384a3ab4af8b9e5685f rdf:first sg:person.01324450712.56
46 rdf:rest rdf:nil
47 Nb360c928d4b14e2f8ef45d8eaa225a19 rdf:first sg:person.01173731606.43
48 rdf:rest Ne8bcc2434e6e45a8b6a19a59f1e7cb71
49 Nd617fe4928da451e85d473152c8321f3 rdf:first N09732b4070b94c6b80632782d95e8cf1
50 rdf:rest rdf:nil
51 Ndd2976e0b4214213bd44ac9abfbc64ac schema:isbn 978-3-540-20127-4
52 978-3-540-39880-6
53 schema:name Longe-Range Charge Transfer in DNA I
54 rdf:type schema:Book
55 Ne8bcc2434e6e45a8b6a19a59f1e7cb71 rdf:first sg:person.01070504175.03
56 rdf:rest N54fa5302172a4b118b0637274827dc7e
57 Nef0f12a0ebd7455eb0c50b5cedd47733 schema:name dimensions_id
58 schema:value pub.1029186690
59 rdf:type schema:PropertyValue
60 anzsrc-for:03 schema:inDefinedTermSet anzsrc-for:
61 schema:name Chemical Sciences
62 rdf:type schema:DefinedTerm
63 anzsrc-for:0306 schema:inDefinedTermSet anzsrc-for:
64 schema:name Physical Chemistry (incl. Structural)
65 rdf:type schema:DefinedTerm
66 sg:person.01037437036.28 schema:affiliation https://www.grid.ac/institutes/grid.86715.3d
67 schema:familyName Wagner
68 schema:givenName J. Richard
69 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01037437036.28
70 rdf:type schema:Person
71 sg:person.01070504175.03 schema:affiliation https://www.grid.ac/institutes/grid.425129.9
72 schema:familyName Angelov
73 schema:givenName Dimitar
74 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01070504175.03
75 rdf:type schema:Person
76 sg:person.01173731606.43 schema:affiliation https://www.grid.ac/institutes/grid.457348.9
77 schema:familyName Ravanat
78 schema:givenName Jean-Luc
79 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01173731606.43
80 rdf:type schema:Person
81 sg:person.01304317106.95 schema:affiliation https://www.grid.ac/institutes/grid.457348.9
82 schema:familyName Douki
83 schema:givenName Thierry
84 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01304317106.95
85 rdf:type schema:Person
86 sg:person.01324450712.56 schema:affiliation https://www.grid.ac/institutes/grid.457348.9
87 schema:familyName Cadet
88 schema:givenName Jean
89 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01324450712.56
90 rdf:type schema:Person
91 https://www.grid.ac/institutes/grid.425129.9 schema:alternateName Georgi Nadjakov Institute of Solid State Physics
92 schema:name Institute of Solid State Physics, Bulgarian Academy of Sciences, 1784 Sofia, Bulgaria
93 rdf:type schema:Organization
94 https://www.grid.ac/institutes/grid.457348.9 schema:alternateName CEA Grenoble
95 schema:name Laboratoire “Lésions des Acides Nucléiques”, SCIB, Département de Recherche Fondamentale sur la Matière Condensée, CEA/Grenoble, 38054 Grenoble Cedex 9, France
96 rdf:type schema:Organization
97 https://www.grid.ac/institutes/grid.86715.3d schema:alternateName Université de Sherbrooke
98 schema:name Département de Médecine Nucléaire et Radiobiologie, Faculté de médecine, Université de Sherbrooke, Sherbrooke, Québec , J1H 5N4, Canada
99 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...