Flexible Semantic Querying of Clinical Archetypes View Full Text


Ontology type: schema:Chapter     


Chapter Info

DATE

2010

AUTHORS

Catalina Martínez-Costa , José Antonio Miñarro-Giménez , Marcos Menárguez-Tortosa , Rafael Valencia-García , Jesualdo Tomás Fernández-Breis

ABSTRACT

In the last years, a number of semantic biomedical systems have been developed. However, their query interfaces are not easy to use for biomedical researchers since they require expertise in semantic languages. Consequently, its practical usage is limited. In this paper, we address this issue by moving the complexity in the design of the semantic query from knowing such query languages to exploring the domain ontology. We also report how this system has been applied to query a semantic repository of clinical archetypes. More... »

PAGES

597-606

Book

TITLE

Knowledge-Based and Intelligent Information and Engineering Systems

ISBN

978-3-642-15386-0
978-3-642-15387-7

Author Affiliations

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/978-3-642-15387-7_63

DOI

http://dx.doi.org/10.1007/978-3-642-15387-7_63

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1036466330


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0806", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Information Systems", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/08", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Information and Computing Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "affiliation": {
          "alternateName": "University of Murcia", 
          "id": "https://www.grid.ac/institutes/grid.10586.3a", 
          "name": [
            "Departamento de Informatica y Sistemas, Universidad de Murcia, Spain"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Mart\u00ednez-Costa", 
        "givenName": "Catalina", 
        "id": "sg:person.01364332124.22", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01364332124.22"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Murcia", 
          "id": "https://www.grid.ac/institutes/grid.10586.3a", 
          "name": [
            "Departamento de Informatica y Sistemas, Universidad de Murcia, Spain"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Mi\u00f1arro-Gim\u00e9nez", 
        "givenName": "Jos\u00e9 Antonio", 
        "id": "sg:person.01325124500.00", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01325124500.00"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Murcia", 
          "id": "https://www.grid.ac/institutes/grid.10586.3a", 
          "name": [
            "Departamento de Informatica y Sistemas, Universidad de Murcia, Spain"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Men\u00e1rguez-Tortosa", 
        "givenName": "Marcos", 
        "id": "sg:person.01175065155.05", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01175065155.05"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Murcia", 
          "id": "https://www.grid.ac/institutes/grid.10586.3a", 
          "name": [
            "Departamento de Informatica y Sistemas, Universidad de Murcia, Spain"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Valencia-Garc\u00eda", 
        "givenName": "Rafael", 
        "id": "sg:person.012051275321.61", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.012051275321.61"
        ], 
        "type": "Person"
      }, 
      {
        "affiliation": {
          "alternateName": "University of Murcia", 
          "id": "https://www.grid.ac/institutes/grid.10586.3a", 
          "name": [
            "Departamento de Informatica y Sistemas, Universidad de Murcia, Spain"
          ], 
          "type": "Organization"
        }, 
        "familyName": "Fern\u00e1ndez-Breis", 
        "givenName": "Jesualdo Tom\u00e1s", 
        "id": "sg:person.01335161422.06", 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01335161422.06"
        ], 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "sg:pub.10.1007/978-3-540-72667-8_34", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1002037984", 
          "https://doi.org/10.1007/978-3-540-72667-8_34"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/j.jbi.2008.05.005", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1004727626"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-3-540-76298-0_26", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010769660", 
          "https://doi.org/10.1007/978-3-540-76298-0_26"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-3-540-76298-0_26", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1010769660", 
          "https://doi.org/10.1007/978-3-540-76298-0_26"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/11589990_45", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012855414", 
          "https://doi.org/10.1007/11589990_45"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/11589990_45", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1012855414", 
          "https://doi.org/10.1007/11589990_45"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/11926078_11", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030079736", 
          "https://doi.org/10.1007/11926078_11"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/11926078_11", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030079736", 
          "https://doi.org/10.1007/11926078_11"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-3-540-76848-7_60", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040140301", 
          "https://doi.org/10.1007/978-3-540-76848-7_60"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-3-540-76848-7_60", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1040140301", 
          "https://doi.org/10.1007/978-3-540-76848-7_60"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1186/1471-2105-10-s10-s11", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043572933", 
          "https://doi.org/10.1186/1471-2105-10-s10-s11"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/978-3-540-76298-0_21", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1047696604", 
          "https://doi.org/10.1007/978-3-540-76298-0_21"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/scientificamerican0501-34", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1056527616", 
          "https://doi.org/10.1038/scientificamerican0501-34"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2010", 
    "datePublishedReg": "2010-01-01", 
    "description": "In the last years, a number of semantic biomedical systems have been developed. However, their query interfaces are not easy to use for biomedical researchers since they require expertise in semantic languages. Consequently, its practical usage is limited. In this paper, we address this issue by moving the complexity in the design of the semantic query from knowing such query languages to exploring the domain ontology. We also report how this system has been applied to query a semantic repository of clinical archetypes.", 
    "editor": [
      {
        "familyName": "Setchi", 
        "givenName": "Rossitza", 
        "type": "Person"
      }, 
      {
        "familyName": "Jordanov", 
        "givenName": "Ivan", 
        "type": "Person"
      }, 
      {
        "familyName": "Howlett", 
        "givenName": "Robert J.", 
        "type": "Person"
      }, 
      {
        "familyName": "Jain", 
        "givenName": "Lakhmi C.", 
        "type": "Person"
      }
    ], 
    "genre": "chapter", 
    "id": "sg:pub.10.1007/978-3-642-15387-7_63", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": {
      "isbn": [
        "978-3-642-15386-0", 
        "978-3-642-15387-7"
      ], 
      "name": "Knowledge-Based and Intelligent Information and Engineering Systems", 
      "type": "Book"
    }, 
    "name": "Flexible Semantic Querying of Clinical Archetypes", 
    "pagination": "597-606", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1036466330"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/978-3-642-15387-7_63"
        ]
      }, 
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "adb629fba5c4dabd83881a11146fc28afe50f63fea4028e0be8fad1982d7edf4"
        ]
      }
    ], 
    "publisher": {
      "location": "Berlin, Heidelberg", 
      "name": "Springer Berlin Heidelberg", 
      "type": "Organisation"
    }, 
    "sameAs": [
      "https://doi.org/10.1007/978-3-642-15387-7_63", 
      "https://app.dimensions.ai/details/publication/pub.1036466330"
    ], 
    "sdDataset": "chapters", 
    "sdDatePublished": "2019-04-16T08:16", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000362_0000000362/records_87078_00000001.jsonl", 
    "type": "Chapter", 
    "url": "https://link.springer.com/10.1007%2F978-3-642-15387-7_63"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/978-3-642-15387-7_63'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/978-3-642-15387-7_63'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/978-3-642-15387-7_63'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/978-3-642-15387-7_63'


 

This table displays all metadata directly associated to this object as RDF triples.

143 TRIPLES      23 PREDICATES      36 URIs      20 LITERALS      8 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/978-3-642-15387-7_63 schema:about anzsrc-for:08
2 anzsrc-for:0806
3 schema:author N86e0f788037c4f96a73b76c81d422988
4 schema:citation sg:pub.10.1007/11589990_45
5 sg:pub.10.1007/11926078_11
6 sg:pub.10.1007/978-3-540-72667-8_34
7 sg:pub.10.1007/978-3-540-76298-0_21
8 sg:pub.10.1007/978-3-540-76298-0_26
9 sg:pub.10.1007/978-3-540-76848-7_60
10 sg:pub.10.1038/scientificamerican0501-34
11 sg:pub.10.1186/1471-2105-10-s10-s11
12 https://doi.org/10.1016/j.jbi.2008.05.005
13 schema:datePublished 2010
14 schema:datePublishedReg 2010-01-01
15 schema:description In the last years, a number of semantic biomedical systems have been developed. However, their query interfaces are not easy to use for biomedical researchers since they require expertise in semantic languages. Consequently, its practical usage is limited. In this paper, we address this issue by moving the complexity in the design of the semantic query from knowing such query languages to exploring the domain ontology. We also report how this system has been applied to query a semantic repository of clinical archetypes.
16 schema:editor N5d89b84118bb477e91e87162f92fdfc3
17 schema:genre chapter
18 schema:inLanguage en
19 schema:isAccessibleForFree false
20 schema:isPartOf N2e06f79213f3495d907e2685ab32c0e9
21 schema:name Flexible Semantic Querying of Clinical Archetypes
22 schema:pagination 597-606
23 schema:productId N1035a27424114d318e2a6d878edcc4dc
24 N9ef21ef2d22a4a8394185d2df9994aa4
25 Ne46f42e3cf5547d281f80a4d1cb9fe96
26 schema:publisher N369f0331c9004cff9f3d5c9a5ea386c3
27 schema:sameAs https://app.dimensions.ai/details/publication/pub.1036466330
28 https://doi.org/10.1007/978-3-642-15387-7_63
29 schema:sdDatePublished 2019-04-16T08:16
30 schema:sdLicense https://scigraph.springernature.com/explorer/license/
31 schema:sdPublisher Na1b1f432d8de42b6aec8139a56b1ef7e
32 schema:url https://link.springer.com/10.1007%2F978-3-642-15387-7_63
33 sgo:license sg:explorer/license/
34 sgo:sdDataset chapters
35 rdf:type schema:Chapter
36 N1035a27424114d318e2a6d878edcc4dc schema:name doi
37 schema:value 10.1007/978-3-642-15387-7_63
38 rdf:type schema:PropertyValue
39 N2e06f79213f3495d907e2685ab32c0e9 schema:isbn 978-3-642-15386-0
40 978-3-642-15387-7
41 schema:name Knowledge-Based and Intelligent Information and Engineering Systems
42 rdf:type schema:Book
43 N369f0331c9004cff9f3d5c9a5ea386c3 schema:location Berlin, Heidelberg
44 schema:name Springer Berlin Heidelberg
45 rdf:type schema:Organisation
46 N470c4b4b2ec241f59b3aa1e293e8bbc4 schema:familyName Howlett
47 schema:givenName Robert J.
48 rdf:type schema:Person
49 N5d89b84118bb477e91e87162f92fdfc3 rdf:first Na4e38e6e19444237b59e2f63cfd42abd
50 rdf:rest Nf8cae1ee6de04209b2505a71946eac61
51 N7b795d6512324f52af29fa7796639054 rdf:first sg:person.012051275321.61
52 rdf:rest N86f251e9e4dd416c88d4f4b00b29f7e4
53 N86e0f788037c4f96a73b76c81d422988 rdf:first sg:person.01364332124.22
54 rdf:rest Ncbab2e353c3240b5b7211e81762bba23
55 N86f251e9e4dd416c88d4f4b00b29f7e4 rdf:first sg:person.01335161422.06
56 rdf:rest rdf:nil
57 N9ef21ef2d22a4a8394185d2df9994aa4 schema:name dimensions_id
58 schema:value pub.1036466330
59 rdf:type schema:PropertyValue
60 Na1b1f432d8de42b6aec8139a56b1ef7e schema:name Springer Nature - SN SciGraph project
61 rdf:type schema:Organization
62 Na4e38e6e19444237b59e2f63cfd42abd schema:familyName Setchi
63 schema:givenName Rossitza
64 rdf:type schema:Person
65 Nabb0a3b319bf4b72bd6156d52f408589 schema:familyName Jordanov
66 schema:givenName Ivan
67 rdf:type schema:Person
68 Nad1374a92454435aa0b61c2935d186f5 schema:familyName Jain
69 schema:givenName Lakhmi C.
70 rdf:type schema:Person
71 Ncbab2e353c3240b5b7211e81762bba23 rdf:first sg:person.01325124500.00
72 rdf:rest Neec45ea69ba240df9d2ba83910ac9ec3
73 Nd919f7a781364325971e8ceebe701d0b rdf:first N470c4b4b2ec241f59b3aa1e293e8bbc4
74 rdf:rest Ne74905358465445ea7ca50e867768472
75 Ne46f42e3cf5547d281f80a4d1cb9fe96 schema:name readcube_id
76 schema:value adb629fba5c4dabd83881a11146fc28afe50f63fea4028e0be8fad1982d7edf4
77 rdf:type schema:PropertyValue
78 Ne74905358465445ea7ca50e867768472 rdf:first Nad1374a92454435aa0b61c2935d186f5
79 rdf:rest rdf:nil
80 Neec45ea69ba240df9d2ba83910ac9ec3 rdf:first sg:person.01175065155.05
81 rdf:rest N7b795d6512324f52af29fa7796639054
82 Nf8cae1ee6de04209b2505a71946eac61 rdf:first Nabb0a3b319bf4b72bd6156d52f408589
83 rdf:rest Nd919f7a781364325971e8ceebe701d0b
84 anzsrc-for:08 schema:inDefinedTermSet anzsrc-for:
85 schema:name Information and Computing Sciences
86 rdf:type schema:DefinedTerm
87 anzsrc-for:0806 schema:inDefinedTermSet anzsrc-for:
88 schema:name Information Systems
89 rdf:type schema:DefinedTerm
90 sg:person.01175065155.05 schema:affiliation https://www.grid.ac/institutes/grid.10586.3a
91 schema:familyName Menárguez-Tortosa
92 schema:givenName Marcos
93 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01175065155.05
94 rdf:type schema:Person
95 sg:person.012051275321.61 schema:affiliation https://www.grid.ac/institutes/grid.10586.3a
96 schema:familyName Valencia-García
97 schema:givenName Rafael
98 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.012051275321.61
99 rdf:type schema:Person
100 sg:person.01325124500.00 schema:affiliation https://www.grid.ac/institutes/grid.10586.3a
101 schema:familyName Miñarro-Giménez
102 schema:givenName José Antonio
103 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01325124500.00
104 rdf:type schema:Person
105 sg:person.01335161422.06 schema:affiliation https://www.grid.ac/institutes/grid.10586.3a
106 schema:familyName Fernández-Breis
107 schema:givenName Jesualdo Tomás
108 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01335161422.06
109 rdf:type schema:Person
110 sg:person.01364332124.22 schema:affiliation https://www.grid.ac/institutes/grid.10586.3a
111 schema:familyName Martínez-Costa
112 schema:givenName Catalina
113 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01364332124.22
114 rdf:type schema:Person
115 sg:pub.10.1007/11589990_45 schema:sameAs https://app.dimensions.ai/details/publication/pub.1012855414
116 https://doi.org/10.1007/11589990_45
117 rdf:type schema:CreativeWork
118 sg:pub.10.1007/11926078_11 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030079736
119 https://doi.org/10.1007/11926078_11
120 rdf:type schema:CreativeWork
121 sg:pub.10.1007/978-3-540-72667-8_34 schema:sameAs https://app.dimensions.ai/details/publication/pub.1002037984
122 https://doi.org/10.1007/978-3-540-72667-8_34
123 rdf:type schema:CreativeWork
124 sg:pub.10.1007/978-3-540-76298-0_21 schema:sameAs https://app.dimensions.ai/details/publication/pub.1047696604
125 https://doi.org/10.1007/978-3-540-76298-0_21
126 rdf:type schema:CreativeWork
127 sg:pub.10.1007/978-3-540-76298-0_26 schema:sameAs https://app.dimensions.ai/details/publication/pub.1010769660
128 https://doi.org/10.1007/978-3-540-76298-0_26
129 rdf:type schema:CreativeWork
130 sg:pub.10.1007/978-3-540-76848-7_60 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040140301
131 https://doi.org/10.1007/978-3-540-76848-7_60
132 rdf:type schema:CreativeWork
133 sg:pub.10.1038/scientificamerican0501-34 schema:sameAs https://app.dimensions.ai/details/publication/pub.1056527616
134 https://doi.org/10.1038/scientificamerican0501-34
135 rdf:type schema:CreativeWork
136 sg:pub.10.1186/1471-2105-10-s10-s11 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043572933
137 https://doi.org/10.1186/1471-2105-10-s10-s11
138 rdf:type schema:CreativeWork
139 https://doi.org/10.1016/j.jbi.2008.05.005 schema:sameAs https://app.dimensions.ai/details/publication/pub.1004727626
140 rdf:type schema:CreativeWork
141 https://www.grid.ac/institutes/grid.10586.3a schema:alternateName University of Murcia
142 schema:name Departamento de Informatica y Sistemas, Universidad de Murcia, Spain
143 rdf:type schema:Organization
 




Preview window. Press ESC to close (or click here)


...