Information Visualization for Biological Data View Full Text


Ontology type: schema:Chapter     


Chapter Info

DATE

2017

AUTHORS

Tobias Czauderna , Falk Schreiber

ABSTRACT

Visualization is a powerful method to present and explore a large amount of data. It is increasingly important in the life sciences and is used for analyzing different types of biological data, such as structural information, high-throughput data, and biochemical networks. This chapter gives a brief introduction to visualization methods for bioinformatics, presents two commonly used techniques in detail, and discusses a graphical standard for biological networks and cellular processes. More... »

PAGES

403-415

References to SciGraph publications

  • 2004-12. Visualising very large phylogenetic trees in three dimensional hyperbolic space in BMC BIOINFORMATICS
  • 2009-08. The Systems Biology Graphical Notation in NATURE BIOTECHNOLOGY
  • 2013. BioModels Database: A Repository of Mathematical Models of Biological Processes in IN SILICO SYSTEMS BIOLOGY
  • 2006-12. VANTED: A system for advanced data analysis and visualization in the context of biological networks in BMC BIOINFORMATICS
  • 2004-12. Visualization and analysis of microarray and gene ontology data with treemaps in BMC BIOINFORMATICS
  • 2002-12. Protein microarrays and proteomics in NATURE GENETICS
  • 2014-12. CIRCUS: a package for Circos display of structural genome variations from paired-end and mate-pair sequencing data in BMC BIOINFORMATICS
  • 2007-12. Dendroscope: An interactive viewer for large phylogenetic trees in BMC BIOINFORMATICS
  • 2006-12. Exploration of biological network centralities with CentiBiN in BMC BIOINFORMATICS
  • 2013-12. Path2Models: large-scale generation of computational models from biochemical pathway maps in BMC SYSTEMS BIOLOGY
  • 2005. Gravisto: Graph Visualization Toolkit in GRAPH DRAWING
  • 2010-03. Visualization of omics data for systems biology in NATURE METHODS
  • 2012-03-01. Creating interactive, web-based and data-enriched maps with the Systems Biology Graphical Notation in NATURE PROTOCOLS
  • 2012-12. VANTED v2: a framework for systems biology applications in BMC SYSTEMS BIOLOGY
  • 2004. A Constrained, Force-Directed Layout Algorithm for Biological Pathways in GRAPH DRAWING
  • 2014. Network Visualization for Integrative Bioinformatics in APPROACHES IN INTEGRATIVE BIOINFORMATICS
  • Identifiers

    URI

    http://scigraph.springernature.com/pub.10.1007/978-1-4939-6613-4_21

    DOI

    http://dx.doi.org/10.1007/978-1-4939-6613-4_21

    DIMENSIONS

    https://app.dimensions.ai/details/publication/pub.1020605939

    PUBMED

    https://www.ncbi.nlm.nih.gov/pubmed/27896753


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