Analysis of Chromatin–Nuclear Receptor Interactions by Laser-Chromatin Immunoprecipitation View Full Text


Ontology type: schema:Chapter     


Chapter Info

DATE

2014

AUTHORS

Rosaria Benedetti , Mariarosaria Conte , Vincenzo Carafa , Bartolomeo Della Ventura , Carlo Altucci , Raffaele Velotta , Hendrik G. Stunnenberg , Lucia Altucci , Angela Nebbioso

ABSTRACT

Better defining the dynamics of biomolecular interactions is an important step in understanding molecular biology and cellular processes. DNA-protein interactions, and specifically hormone-triggered DNA-nuclear receptor interactions, are key events which are still poorly understood. To date, the most commonly used approach in studying chromatin interactions is the immunoprecipitation of chemically cross-linked chromatin (ChIP) coupled with single gene or global genomic analyses. Currently, establishing a stable interplay between nucleic acids and proteins (DNA-protein cross-link) is mainly obtained through conventional, diffusion-triggered, chemical methods using formaldehyde. Here we describe an alternative method, called Laser-ChIP (LChIP), for the specific analysis of interactions between chromatin and nuclear receptors driven by a UV laser energy source. Photo-induced cross-linking in LChIP is achieved very rapidly, allowing the study of transient interactions, depending on laser source parameters. More... »

PAGES

25-34

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/978-1-4939-1346-6_3

DOI

http://dx.doi.org/10.1007/978-1-4939-1346-6_3

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1012067678

PUBMED

https://www.ncbi.nlm.nih.gov/pubmed/25182758


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