Detecting Natural Selection by Comparing Geographic Variation in Protein and DNA Polymorphisms View Full Text


Ontology type: schema:Chapter     


Chapter Info

DATE

1994

AUTHORS

John H. McDonald

ABSTRACT

Comparing the amount of geographic variation in allele frequencies for protein and DNA polymorphisms is a powerful method for detecting the effects of selection. Some statistical artifacts must be kept in mind however. Simulations indicate that estimators of Wright’s FST are much better measures of geographic variation than are genetic distance measures; that pooling alleles so that all polymorphisms are treated as two-allele polymorphisms is sometimes necessary to avoid statistical artifacts; and that for a given total sample size two or three population samples can be just as efficient at detecting selection as a larger number of smaller samples. More... »

PAGES

88-100

Book

TITLE

Non-Neutral Evolution

ISBN

978-0-412-05391-7
978-1-4615-2383-3

Identifiers

URI

http://scigraph.springernature.com/pub.10.1007/978-1-4615-2383-3_8

DOI

http://dx.doi.org/10.1007/978-1-4615-2383-3_8

DIMENSIONS

https://app.dimensions.ai/details/publication/pub.1040516754


Indexing Status Check whether this publication has been indexed by Scopus and Web Of Science using the SN Indexing Status Tool
Incoming Citations Browse incoming citations for this publication using opencitations.net

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/0604", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Genetics", 
        "type": "DefinedTerm"
      }, 
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/06", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "name": "Biological Sciences", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "familyName": "McDonald", 
        "givenName": "John H.", 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1016/0040-5809(77)90014-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1003979138"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0040-5809(77)90013-2", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1029142272"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00392635", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030415360", 
          "https://doi.org/10.1007/bf00392635"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1007/bf00392635", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1030415360", 
          "https://doi.org/10.1007/bf00392635"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/hdy.1991.82", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031493994", 
          "https://doi.org/10.1038/hdy.1991.82"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/hdy.1991.82", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1031493994", 
          "https://doi.org/10.1038/hdy.1991.82"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1016/0040-5809(72)90035-4", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1034870530"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1086/282771", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1058592894"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.1348870", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062476827"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2406616", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1069915803"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2408586", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1069917587"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.2307/2408641", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1069917637"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1074806437", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1082574219", 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://app.dimensions.ai/details/publication/pub.1082651826", 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "1994", 
    "datePublishedReg": "1994-01-01", 
    "description": "Comparing the amount of geographic variation in allele frequencies for protein and DNA polymorphisms is a powerful method for detecting the effects of selection. Some statistical artifacts must be kept in mind however. Simulations indicate that estimators of Wright\u2019s FST are much better measures of geographic variation than are genetic distance measures; that pooling alleles so that all polymorphisms are treated as two-allele polymorphisms is sometimes necessary to avoid statistical artifacts; and that for a given total sample size two or three population samples can be just as efficient at detecting selection as a larger number of smaller samples.", 
    "editor": [
      {
        "familyName": "Golding", 
        "givenName": "Brian", 
        "type": "Person"
      }
    ], 
    "genre": "chapter", 
    "id": "sg:pub.10.1007/978-1-4615-2383-3_8", 
    "inLanguage": [
      "en"
    ], 
    "isAccessibleForFree": false, 
    "isPartOf": {
      "isbn": [
        "978-0-412-05391-7", 
        "978-1-4615-2383-3"
      ], 
      "name": "Non-Neutral Evolution", 
      "type": "Book"
    }, 
    "name": "Detecting Natural Selection by Comparing Geographic Variation in Protein and DNA Polymorphisms", 
    "pagination": "88-100", 
    "productId": [
      {
        "name": "dimensions_id", 
        "type": "PropertyValue", 
        "value": [
          "pub.1040516754"
        ]
      }, 
      {
        "name": "doi", 
        "type": "PropertyValue", 
        "value": [
          "10.1007/978-1-4615-2383-3_8"
        ]
      }, 
      {
        "name": "readcube_id", 
        "type": "PropertyValue", 
        "value": [
          "c101520b88d422f87bb373d6a320ae638eb5477f686f8fd857c30017c47d669f"
        ]
      }
    ], 
    "publisher": {
      "location": "Boston, MA", 
      "name": "Springer US", 
      "type": "Organisation"
    }, 
    "sameAs": [
      "https://doi.org/10.1007/978-1-4615-2383-3_8", 
      "https://app.dimensions.ai/details/publication/pub.1040516754"
    ], 
    "sdDataset": "chapters", 
    "sdDatePublished": "2019-04-16T08:50", 
    "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
    "sdPublisher": {
      "name": "Springer Nature - SN SciGraph project", 
      "type": "Organization"
    }, 
    "sdSource": "s3://com-uberresearch-data-dimensions-target-20181106-alternative/cleanup/v134/2549eaecd7973599484d7c17b260dba0a4ecb94b/merge/v9/a6c9fde33151104705d4d7ff012ea9563521a3ce/jats-lookup/v90/0000000368_0000000368/records_78941_00000000.jsonl", 
    "type": "Chapter", 
    "url": "https://link.springer.com/10.1007%2F978-1-4615-2383-3_8"
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/pub.10.1007/978-1-4615-2383-3_8'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/pub.10.1007/978-1-4615-2383-3_8'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/pub.10.1007/978-1-4615-2383-3_8'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/pub.10.1007/978-1-4615-2383-3_8'


 

This table displays all metadata directly associated to this object as RDF triples.

98 TRIPLES      23 PREDICATES      40 URIs      20 LITERALS      8 BLANK NODES

Subject Predicate Object
1 sg:pub.10.1007/978-1-4615-2383-3_8 schema:about anzsrc-for:06
2 anzsrc-for:0604
3 schema:author N9b2e39250ef646f985ba086dd57aabbf
4 schema:citation sg:pub.10.1007/bf00392635
5 sg:pub.10.1038/hdy.1991.82
6 https://app.dimensions.ai/details/publication/pub.1074806437
7 https://app.dimensions.ai/details/publication/pub.1082574219
8 https://app.dimensions.ai/details/publication/pub.1082651826
9 https://doi.org/10.1016/0040-5809(72)90035-4
10 https://doi.org/10.1016/0040-5809(77)90013-2
11 https://doi.org/10.1016/0040-5809(77)90014-4
12 https://doi.org/10.1086/282771
13 https://doi.org/10.1126/science.1348870
14 https://doi.org/10.2307/2406616
15 https://doi.org/10.2307/2408586
16 https://doi.org/10.2307/2408641
17 schema:datePublished 1994
18 schema:datePublishedReg 1994-01-01
19 schema:description Comparing the amount of geographic variation in allele frequencies for protein and DNA polymorphisms is a powerful method for detecting the effects of selection. Some statistical artifacts must be kept in mind however. Simulations indicate that estimators of Wright’s FST are much better measures of geographic variation than are genetic distance measures; that pooling alleles so that all polymorphisms are treated as two-allele polymorphisms is sometimes necessary to avoid statistical artifacts; and that for a given total sample size two or three population samples can be just as efficient at detecting selection as a larger number of smaller samples.
20 schema:editor N2c0753040f844465a5eaaf81ab417f09
21 schema:genre chapter
22 schema:inLanguage en
23 schema:isAccessibleForFree false
24 schema:isPartOf N673160aea0694a61bc486c1438bc3899
25 schema:name Detecting Natural Selection by Comparing Geographic Variation in Protein and DNA Polymorphisms
26 schema:pagination 88-100
27 schema:productId N233692718ed54f79b778c4b66103f43c
28 N54db6d52a8c5407593de7159dbeaae10
29 N6054926262ce421684e5995a4c94306d
30 schema:publisher N21e3a208560f496c8269630fda8daf04
31 schema:sameAs https://app.dimensions.ai/details/publication/pub.1040516754
32 https://doi.org/10.1007/978-1-4615-2383-3_8
33 schema:sdDatePublished 2019-04-16T08:50
34 schema:sdLicense https://scigraph.springernature.com/explorer/license/
35 schema:sdPublisher N114ecd18edd94c24aa969124a04caa0f
36 schema:url https://link.springer.com/10.1007%2F978-1-4615-2383-3_8
37 sgo:license sg:explorer/license/
38 sgo:sdDataset chapters
39 rdf:type schema:Chapter
40 N114ecd18edd94c24aa969124a04caa0f schema:name Springer Nature - SN SciGraph project
41 rdf:type schema:Organization
42 N21e3a208560f496c8269630fda8daf04 schema:location Boston, MA
43 schema:name Springer US
44 rdf:type schema:Organisation
45 N233692718ed54f79b778c4b66103f43c schema:name dimensions_id
46 schema:value pub.1040516754
47 rdf:type schema:PropertyValue
48 N2c0753040f844465a5eaaf81ab417f09 rdf:first N48260de2ad1d43faa2cc2bbc1ace4cb5
49 rdf:rest rdf:nil
50 N30fe2b2181e74b089062b40f8eebdf3c schema:familyName McDonald
51 schema:givenName John H.
52 rdf:type schema:Person
53 N48260de2ad1d43faa2cc2bbc1ace4cb5 schema:familyName Golding
54 schema:givenName Brian
55 rdf:type schema:Person
56 N54db6d52a8c5407593de7159dbeaae10 schema:name doi
57 schema:value 10.1007/978-1-4615-2383-3_8
58 rdf:type schema:PropertyValue
59 N6054926262ce421684e5995a4c94306d schema:name readcube_id
60 schema:value c101520b88d422f87bb373d6a320ae638eb5477f686f8fd857c30017c47d669f
61 rdf:type schema:PropertyValue
62 N673160aea0694a61bc486c1438bc3899 schema:isbn 978-0-412-05391-7
63 978-1-4615-2383-3
64 schema:name Non-Neutral Evolution
65 rdf:type schema:Book
66 N9b2e39250ef646f985ba086dd57aabbf rdf:first N30fe2b2181e74b089062b40f8eebdf3c
67 rdf:rest rdf:nil
68 anzsrc-for:06 schema:inDefinedTermSet anzsrc-for:
69 schema:name Biological Sciences
70 rdf:type schema:DefinedTerm
71 anzsrc-for:0604 schema:inDefinedTermSet anzsrc-for:
72 schema:name Genetics
73 rdf:type schema:DefinedTerm
74 sg:pub.10.1007/bf00392635 schema:sameAs https://app.dimensions.ai/details/publication/pub.1030415360
75 https://doi.org/10.1007/bf00392635
76 rdf:type schema:CreativeWork
77 sg:pub.10.1038/hdy.1991.82 schema:sameAs https://app.dimensions.ai/details/publication/pub.1031493994
78 https://doi.org/10.1038/hdy.1991.82
79 rdf:type schema:CreativeWork
80 https://app.dimensions.ai/details/publication/pub.1074806437 schema:CreativeWork
81 https://app.dimensions.ai/details/publication/pub.1082574219 schema:CreativeWork
82 https://app.dimensions.ai/details/publication/pub.1082651826 schema:CreativeWork
83 https://doi.org/10.1016/0040-5809(72)90035-4 schema:sameAs https://app.dimensions.ai/details/publication/pub.1034870530
84 rdf:type schema:CreativeWork
85 https://doi.org/10.1016/0040-5809(77)90013-2 schema:sameAs https://app.dimensions.ai/details/publication/pub.1029142272
86 rdf:type schema:CreativeWork
87 https://doi.org/10.1016/0040-5809(77)90014-4 schema:sameAs https://app.dimensions.ai/details/publication/pub.1003979138
88 rdf:type schema:CreativeWork
89 https://doi.org/10.1086/282771 schema:sameAs https://app.dimensions.ai/details/publication/pub.1058592894
90 rdf:type schema:CreativeWork
91 https://doi.org/10.1126/science.1348870 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062476827
92 rdf:type schema:CreativeWork
93 https://doi.org/10.2307/2406616 schema:sameAs https://app.dimensions.ai/details/publication/pub.1069915803
94 rdf:type schema:CreativeWork
95 https://doi.org/10.2307/2408586 schema:sameAs https://app.dimensions.ai/details/publication/pub.1069917587
96 rdf:type schema:CreativeWork
97 https://doi.org/10.2307/2408641 schema:sameAs https://app.dimensions.ai/details/publication/pub.1069917637
98 rdf:type schema:CreativeWork
 




Preview window. Press ESC to close (or click here)


...