Daniel H Huson

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Daniel H



Publications in SciGraph latest 50 shown

  • 2018-03 Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico in NATURE ECOLOGY & EVOLUTION
  • 2018-01 MEGAN-LR: new algorithms allow accurate binning and easy interactive exploration of metagenomic long reads and contigs in BIOLOGY DIRECT
  • 2017-12 Fast and simple protein-alignment-guided assembly of orthologous gene families from microbiome sequencing reads in MICROBIOME
  • 2017-12 Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N2O formation in SCIENTIFIC REPORTS
  • 2017-07-17 Functional Analysis in Metagenomics Using MEGAN 6 in FUNCTIONAL METAGENOMICS: TOOLS AND APPLICATIONS
  • 2017-03-08 Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus in NATURE
  • 2017-03 SILVA, RDP, Greengenes, NCBI and OTT — how do these taxonomies compare? in BMC GENOMICS
  • 2017-02 Genome-guided design of a defined mouse microbiota that confers colonization resistance against Salmonella enterica serovar Typhimurium in NATURE MICROBIOLOGY
  • 2016-12 RiboTagger: fast and unbiased 16S/18S profiling using whole community shotgun metagenomic or metatranscriptome surveys in BMC BIOINFORMATICS
  • 2016-09 A metagenomic-based survey of microbial (de)halogenation potential in a German forest soil in SCIENTIFIC REPORTS
  • 2015-01 Fast and sensitive protein alignment using DIAMOND in NATURE METHODS
  • 2015 MEtaGenome ANalyzer (MEGAN): Metagenomic Expert Resource in ENCYCLOPEDIA OF METAGENOMICS
  • 2014-10 Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis in NATURE
  • 2013-10 Analysis of the intestinal microbiota using SOLiD 16S rRNA gene sequencing and SOLiD shotgun sequencing in BMC GENOMICS
  • 2013 MEtaGenome ANalyzer (MEGAN): Metagenomic Expert Resource in ENCYCLOPEDIA OF METAGENOMICS
  • 2012 Introduction to the Analysis of Environmental Sequences: Metagenomics with MEGAN in EVOLUTIONARY GENOMICS
  • 2011-12 Analysis of 16S rRNA environmental sequences using MEGAN in BMC GENOMICS
  • 2011-12 Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG in BMC BIOINFORMATICS
  • 2010-10 Comparison of multiple metagenomes using phylogenetic networks based on ecological indices in THE ISME JOURNAL
  • 2010 Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project in STANDARDS IN GENOMIC SCIENCES
  • 2010-01 Short clones or long clones? A simulation study on the use of paired reads in metagenomics in BMC BIOINFORMATICS
  • 2009-01 Methods for comparative metagenomics in BMC BIOINFORMATICS
  • 2008-12 Drawing explicit phylogenetic networks and their integration into SplitsTree in BMC EVOLUTIONARY BIOLOGY
  • 2008 Summarizing Multiple Gene Trees Using Cluster Networks in ALGORITHMS IN BIOINFORMATICS
  • 2007-12 Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution in BMC EVOLUTIONARY BIOLOGY
  • 2007-12 Dendroscope: An interactive viewer for large phylogenetic trees in BMC BIOINFORMATICS
  • 2007 Beyond Galled Trees - Decomposition and Computation of Galled Networks in RESEARCH IN COMPUTATIONAL MOLECULAR BIOLOGY
  • 2006 Reducing Distortion in Phylogenetic Networks in ALGORITHMS IN BIOINFORMATICS
  • 2005-11 Conservation and divergence of microRNA families in plants in GENOME BIOLOGY
  • 2005 Reconstruction of Reticulate Networks from Gene Trees in RESEARCH IN COMPUTATIONAL MOLECULAR BIOLOGY
  • 2004-11 Comparative analysis of four Campylobacterales in NATURE REVIEWS MICROBIOLOGY
  • 2004 Phylogenetic Super-networks from Partial Trees in ALGORITHMS IN BIOINFORMATICS
  • 2003 Distance Corrections on Recombinant Sequences in ALGORITHMS IN BIOINFORMATICS
  • 2002-10-10 Segment Match Refinement and Applications in ALGORITHMS IN BIOINFORMATICS
  • 2002-08 The Orbifold Notation for Two-Dimensional Groups in STRUCTURAL CHEMISTRY
  • 2001-07-27 Estimating Large Distances in Phylogenetic Reconstruction in ALGORITHM ENGINEERING
  • 2001 Comparing Assemblies Using Fragments and Mate-Pairs in ALGORITHMS IN BIOINFORMATICS
  • 2000-09 4-Regular Vertex-Transitive Tilings of E3 in DISCRETE & COMPUTATIONAL GEOMETRY
  • 1999-08 Systematic enumeration of crystalline networks in NATURE
  • 1999-02 Tiling Space by Platonic Solids, I in DISCRETE & COMPUTATIONAL GEOMETRY
  • 1998-06 Two finiteness theorems for periodic tilings of d-dimensional euclidean space in DISCRETE & COMPUTATIONAL GEOMETRY
  • 1997-05 Orbifold Triangulations and Crystallographic Groups in PERIODICA MATHEMATICA HUNGARICA
  • 1997-05 Periodic Delone Tilings in PERIODICA MATHEMATICA HUNGARICA
  • 1997 Visualization of Periodic Tilings in VISUALIZATION AND MATHEMATICS
  • 1996-11 Ribbon tilings from spherical ones in GEOMETRIAE DEDICATA
  • 1996-03 Two-dimensional groups, orbifolds and tilings in GEOMETRIAE DEDICATA
  • 1995 An Algorithmic Approach to Tilings in COMBINATORICS ADVANCES
  • 1994-05 A four-color theorem for periodic tilings in GEOMETRIAE DEDICATA
  • 1994 Symmetrie und Topologie in MUSTER DES LEBENDIGEN
  • 1993-09 The generation and classification of tile-k-transitive tilings of the Euclidean plane, the sphere and the hyperbolic plane in GEOMETRIAE DEDICATA
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