Jed A Fuhrman

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Jed A



Publications in SciGraph latest 50 shown

  • 2019-03 Discovery of several novel, widespread, and ecologically distinct marine Thaumarchaeota viruses that encode amoC nitrification genes in THE ISME JOURNAL
  • 2018-12-17 Minimum Information about an Uncultivated Virus Genome (MIUViG) in NATURE BIOTECHNOLOGY
  • 2018-11 Vertical and Seasonal Patterns Control Bacterioplankton Communities at Two Horizontally Coherent Coastal Upwelling Sites off Galicia (NW Spain) in MICROBIAL ECOLOGY
  • 2018-10 Dynamics and interactions of highly resolved marine plankton via automated high-frequency sampling in THE ISME JOURNAL
  • 2018-08 Short-term dynamics and interactions of marine protist communities during the spring–summer transition in THE ISME JOURNAL
  • 2018-07-17 Systematic, continental scale temporal monitoring of marine pelagic microbiota by the Australian Marine Microbial Biodiversity Initiative in SCIENTIFIC DATA
  • 2018-02-01 A non-tailed twist in the viral tale in NATURE
  • 2017-12 VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data in MICROBIOME
  • 2017-11 Author Correction: Re-examination of the relationship between marine virus and microbial cell abundances in NATURE MICROBIOLOGY
  • 2017-11 Marine archaeal dynamics and interactions with the microbial community over 5 years from surface to seafloor in THE ISME JOURNAL
  • 2017-11 A communal catalogue reveals Earth’s multiscale microbial diversity in NATURE
  • 2017-07 Ecological dynamics and co-occurrence among marine phytoplankton, bacteria and myoviruses shows microdiversity matters in THE ISME JOURNAL
  • 2017-03 Prediction of virus-host infectious association by supervised learning methods in BMC BIOINFORMATICS
  • 2016-07 Correlation detection strategies in microbial data sets vary widely in sensitivity and precision in THE ISME JOURNAL
  • 2016-05 Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria in THE ISME JOURNAL
  • 2016-02-29 Pronounced daily succession of phytoplankton, archaea and bacteria following a spring bloom in NATURE MICROBIOLOGY
  • 2016-01-25 Re-examination of the relationship between marine virus and microbial cell abundances in NATURE MICROBIOLOGY
  • 2015-12 Statistical significance approximation in local trend analysis of high-throughput time-series data using the theory of Markov chains in BMC BIOINFORMATICS
  • 2015-12 Cross-depth analysis of marine bacterial networks suggests downward propagation of temporal changes in THE ISME JOURNAL
  • 2015-12 The ocean sampling day consortium in GIGASCIENCE
  • 2015-06 A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes in THE ISME JOURNAL
  • 2015-03 Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years in THE ISME JOURNAL
  • 2015-03 Marine microbial community dynamics and their ecological interpretation in NATURE REVIEWS MICROBIOLOGY
  • 2015 Marine Bacterial, Archaeal, and Protistan Association Networks in ENCYCLOPEDIA OF METAGENOMICS
  • 2014-12 The founding charter of the Genomic Observatories Network in GIGASCIENCE
  • 2014-04 Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists in THE ISME JOURNAL
  • 2013-12 Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight in THE ISME JOURNAL
  • 2013-07 Short-term observations of marine bacterial and viral communities: patterns, connections and resilience in THE ISME JOURNAL
  • 2013 Marine Bacterial, Archaeal, and Protistan Association Networks in ENCYCLOPEDIA OF METAGENOMICS
  • 2012-08 Global distribution and diversity of marine Verrucomicrobia in THE ISME JOURNAL
  • 2012-07 Beyond biogeographic patterns: processes shaping the microbial landscape in NATURE REVIEWS MICROBIOLOGY
  • 2012-06 Unlocking the potential of metagenomics through replicated experimental design in NATURE BIOTECHNOLOGY
  • 2012-02 Defining seasonal marine microbial community dynamics in THE ISME JOURNAL
  • 2011-12 Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates in BMC SYSTEMS BIOLOGY
  • 2011-11-22 The Earth Microbiome Project: The Meeting Report for the 1st International Earth Microbiome Project Conference, Shenzhen, China, June 13th-15th 2011 in STANDARDS IN GENOMIC SCIENCES
  • 2011-09 Marine bacterial, archaeal and protistan association networks reveal ecological linkages in THE ISME JOURNAL
  • 2011-07 Co-occurrence patterns for abundant marine archaeal and bacterial lineages in the deep chlorophyll maximum of coastal California in THE ISME JOURNAL
  • 2011-05 Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications in NATURE BIOTECHNOLOGY
  • 2009-12 Microbial community structure in the North Pacific ocean in THE ISME JOURNAL
  • 2009-07 Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands in THE ISME JOURNAL
  • 2009-05 Microbial community structure and its functional implications in NATURE
  • 2008-06 Proteorhodopsins: an array of physiological roles? in NATURE REVIEWS MICROBIOLOGY
  • 2008 Section 8 update: Correlating single-cell count with function in mixed natural microbial communities through STARFISH in MOLECULAR MICROBIAL ECOLOGY MANUAL
  • 2008 Section 8 - Molecular tools to assess microbial activities in MOLECULAR MICROBIAL ECOLOGY MANUAL
  • 2007-05 Characterization of Lysogens in Bacterioplankton Assemblages of the Southern California Borderland in MICROBIAL ECOLOGY
  • 2007-02 Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I in NATURE PROTOCOLS
  • 2006-02 Improved Strategy for Comparing Microbial Assemblage Fingerprints in MICROBIAL ECOLOGY
  • 2006-02 Microbial biogeography: putting microorganisms on the map in NATURE REVIEWS MICROBIOLOGY
  • 2005-07 Whither or wither geomicrobiology in the era of 'community metagenomics' in NATURE REVIEWS MICROBIOLOGY
  • 2003-11 Bacterial Diversity in Shallow Oligotrophic Marine Benthos and Overlying Waters: Effects of Virus Infection, Containment, and Nutrient Enrichment in MICROBIAL ECOLOGY
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