Rita Casadio

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Publications in SciGraph latest 50 shown

  • 2017-08 eDGAR: a database of Disease-Gene Associations with annotated Relationships among genes in BMC GENOMICS
  • 2016-12 An expanded evaluation of protein function prediction methods shows an improvement in accuracy in GENOME BIOLOGY
  • 2016-12 Genomic and expression analyses of Tursiops truncatus T cell receptor gamma (TRG) and alpha/delta (TRA/TRD) loci reveal a similar basic public γδ repertoire in dolphin and human in BMC GENOMICS
  • 2016-12 Ancient pathogen-driven adaptation triggers increased susceptibility to non-celiac wheat sensitivity in present-day European populations in GENES & NUTRITION
  • 2016-12 Erratum to: Genomic and expression analyses of Tursiops truncatus T cell receptor gamma (TRG) and alpha/delta (TRA/TRD) loci reveal a similar basic public γδ repertoire in dolphin and human in BMC GENOMICS
  • 2016-06 Large scale analysis of protein stability in OMIM disease related human protein variants in BMC GENOMICS
  • 2015-12 NET-GE: a novel NETwork-based Gene Enrichment for detecting biological processes associated to Mendelian diseases in BMC GENOMICS
  • 2015 Computer-Based Prediction of Mitochondria-Targeting Peptides in MITOCHONDRIAL MEDICINE
  • 2014-09 Searching for signatures of cold adaptations in modern and archaic humans: hints from the brown adipose tissue genes in HEREDITY
  • 2014-01 Analysis of all subunits, SDHA, SDHB, SDHC, SDHD, of the succinate dehydrogenase complex in KIT/PDGFRA wild-type GIST in EUROPEAN JOURNAL OF HUMAN GENETICS
  • 2013-12 MIMO: an efficient tool for molecular interaction maps overlap in BMC BIOINFORMATICS
  • 2013-05 WS-SNPs&GO: a web server for predicting the deleterious effect of human protein variants using functional annotation in BMC GENOMICS
  • 2013-03 A large-scale evaluation of computational protein function prediction in NATURE METHODS
  • 2013-02 How to inherit statistically validated annotation within BAR+ protein clusters in BMC BIOINFORMATICS
  • 2013-01 The side chain of glutamine 13 is the acyl-donor amino acid modified by type 2 transglutaminase in subunit T of the native rabbit skeletal muscle troponin complex in AMINO ACIDS
  • 2013 Bitter taste receptor genes in pigs: SNP identification by using next- generation semiconductor sequencing in ENERGY AND PROTEIN METABOLISM AND NUTRITION IN SUSTAINABLE ANIMAL PRODUCTION
  • 2013-01 Prediction of disulfide connectivity in proteins with machine-learning methods and correlated mutations in BMC BIOINFORMATICS
  • 2013-01 Expression of different forms of transglutaminases by immature cells of Helianthus tuberosus sprout apices in AMINO ACIDS
  • 2012-12 A genome wide association study for backfat thickness in Italian Large White pigs highlights new regions affecting fat deposition including neuronal genes in BMC GENOMICS
  • 2012-09 The human "magnesome": detecting magnesium binding sites on human proteins in BMC BIOINFORMATICS
  • 2012-06 On the effect of protein conformation diversity in discriminating among neutral and disease related single amino acid substitutions in BMC GENOMICS
  • 2012-06 Predicting cancer-associated germline variations in proteins in BMC GENOMICS
  • 2012 Machine-Learning Methods to Predict Protein Interaction Sites in Folded Proteins in COMPUTATIONAL INTELLIGENCE METHODS FOR BIOINFORMATICS AND BIOSTATISTICS
  • 2011-12 Blurring contact maps of thousands of proteins: what we can learn by reconstructing 3D structure in BIODATA MINING
  • 2011 Prediction of the Bonding State of Cysteine Residues in Proteins with Machine-Learning Methods in COMPUTATIONAL INTELLIGENCE METHODS FOR BIOINFORMATICS AND BIOSTATISTICS
  • 2010-12 An initial comparative map of copy number variations in the goat (Capra hircus) genome in BMC GENOMICS
  • 2010-09-21 Divide and Conquer Strategies for Protein Structure Prediction in MATHEMATICAL APPROACHES TO POLYMER SEQUENCE ANALYSIS AND RELATED PROBLEMS
  • 2010-06 Thermodynamics of binding of regulatory ligands to tissue transglutaminase in AMINO ACIDS
  • 2010 Improving Coiled-Coil Prediction with Evolutionary Information in COMPUTATIONAL INTELLIGENCE METHODS FOR BIOINFORMATICS AND BIOSTATISTICS
  • 2010 Topology prediction of membrane proteins: how distantly related homologs come into play in STRUCTURAL BIOINFORMATICS OF MEMBRANE PROTEINS
  • 2009-12 Grammatical-Restrained Hidden Conditional Random Fields for Bioinformatics applications in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2009-04 Plant and animal transglutaminases: do similar functions imply similar structures? in AMINO ACIDS
  • 2009-02 Sequence-based feature prediction and annotation of proteins in GENOME BIOLOGY
  • 2009 On the Upper Bound of the Prediction Accuracy of Residue Contacts in Proteins with Correlated Mutations: The Case Study of the Similarity Matrices in ALGORITHMS IN BIOINFORMATICS
  • 2009 A New Protein Representation Based on Fragment Contacts: Towards an Improvement of Contact Maps Predictions in COMPUTATIONAL INTELLIGENCE METHODS FOR BIOINFORMATICS AND BIOSTATISTICS
  • 2009 Prediction of Protein-Protein Interacting Sites: How to Bridge Molecular Events to Large Scale Protein Interaction Networks in COMPUTATIONAL METHODS IN SYSTEMS BIOLOGY
  • 2009 Metals and Metalloids in Photosynthetic Bacteria: Interactions, Resistance and Putative Homeostasis Revealed by Genome Analysis in THE PURPLE PHOTOTROPHIC BACTERIA
  • 2008-12 PredGPI: a GPI-anchor predictor in BMC BIOINFORMATICS
  • 2008-03 A three-state prediction of single point mutations on protein stability changes in BMC BIOINFORMATICS
  • 2008 High Throughput Comparison of Prokaryotic Genomes in PARALLEL PROCESSING AND APPLIED MATHEMATICS
  • 2008 Alternative splicing in the ENCODE protein complement in MODERN GENOME ANNOTATION
  • 2008 Structure prediction of globular proteins in MODERN GENOME ANNOTATION
  • 2008 The state of the art of membrane protein structure prediction: from sequence to 3D structure in MODERN GENOME ANNOTATION
  • 2008 The Pros and Cons of Predicting Protein Contact Maps in PROTEIN STRUCTURE PREDICTION
  • 2007-10-05 The Pros and Cons of Predicting Protein Contact Maps in PROTEIN STRUCTURE PREDICTION, SECOND EDITION
  • 2007-03-13 BaCelLo: a Balanced subCellular Localization predictor. in PROTOCOL EXCHANGE
  • 2007-03 A computational approach for detecting peptidases and their specific inhibitors at the genome level in BMC BIOINFORMATICS
  • 2007-03 Bioinformatics in Italy: BITS2006, the third annual meeting of the Italian Society of Bioinformatics in BMC BIOINFORMATICS
  • 2007 High Throughput Protein Similarity Searches in the LIBI Grid Problem Solving Environment in FRONTIERS OF HIGH PERFORMANCE COMPUTING AND NETWORKING ISPA 2007 WORKSHOPS
  • 2007 Prediction of Structurally-Determined Coiled-Coil Domains with Hidden Markov Models in BIOINFORMATICS RESEARCH AND DEVELOPMENT
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