Peter F Stadler


Ontology type: schema:Person     


Person Info

NAME

Peter F

SURNAME

Stadler

Publications in SciGraph latest 50 shown

  • 2018-12 Coordinate systems for supergenomes in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2018-12 Superbubbles revisited in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2018-12 The Sierra Platinum Service for generating peak-calls for replicated ChIP-seq experiments in BMC RESEARCH NOTES
  • 2018-12 Split-inducing indels in phylogenomic analysis in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2018-12 Finding the K best synthesis plans in JOURNAL OF CHEMINFORMATICS
  • 2018-12 Identification and characterization of novel conserved RNA structures in Drosophila in BMC GENOMICS
  • 2017-12 STAT3-induced long noncoding RNAs in multiple myeloma cells display different properties in cancer in SCIENTIFIC REPORTS
  • 2017-07 The mathematics of xenology: di-cographs, symbolic ultrametrics, 2-structures and tree-representable systems of binary relations in JOURNAL OF MATHEMATICAL BIOLOGY
  • 2017 Chemical Graph Transformation with Stereo-Information in GRAPH TRANSFORMATION
  • 2016-12 The paralog-to-contig assignment problem: high quality gene models from fragmented assemblies in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2016-12 Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells in SCIENTIFIC REPORTS
  • 2016-12 Phylogenetic distribution of plant snoRNA families in BMC GENOMICS
  • 2016-12 SnoReport 2.0: new features and a refined Support Vector Machine to improve snoRNA identification in BMC BIOINFORMATICS
  • 2016 A Software Package for Chemically Inspired Graph Transformation in GRAPH TRANSFORMATION
  • 2015-12 Kiwi genome provides insights into evolution of a nocturnal lifestyle in GENOME BIOLOGY
  • 2015-12 The relativity of biological function in THEORY IN BIOSCIENCES
  • 2015-12 A simple data-adaptive probabilistic variant calling model in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2015-11 DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control in NATURE GENETICS
  • 2014-12 Graph-distance distribution of the Boltzmann ensemble of RNA secondary structures in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2014-12 TSSAR: TSS annotation regime for dRNA-seq data in BMC BIOINFORMATICS
  • 2014-03 Cell cycle, oncogenic and tumor suppressor pathways regulate numerous long and macro non-protein-coding RNAs in GENOME BIOLOGY
  • 2014 50 Shades of Rule Composition in FORMAL METHODS IN MACRO-BIOLOGY
  • 2014 Geometry and Coarse-Grained Representations of Landscapes in RECENT ADVANCES IN THE THEORY AND APPLICATION OF FITNESS LANDSCAPES
  • 2013-12 LocARNAscan: Incorporating thermodynamic stability in sequence and structure-based RNA homology search in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2013-12 Inferring chemical reaction patterns using rule composition in graph grammars in JOURNAL OF SYSTEMS CHEMISTRY
  • 2013-09 On the Complexity of Reconstructing Chemical Reaction Networks in MATHEMATICS IN COMPUTER SCIENCE
  • 2013-07 The duck genome and transcriptome provide insight into an avian influenza virus reservoir species in NATURE GENETICS
  • 2013 Atom Mapping with Constraint Programming in PRINCIPLES AND PRACTICE OF CONSTRAINT PROGRAMMING
  • 2013 Distribution of Graph-Distances in Boltzmann Ensembles of RNA Secondary Structures in ALGORITHMS IN BIOINFORMATICS
  • 2013 How to Multiply Dynamic Programming Algorithms in ADVANCES IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY
  • 2013 ncRNA-Agents: A Multiagent System for Non-coding RNA Annotation in ADVANCES IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY
  • 2012-11 Analyses of pig genomes provide insight into porcine demography and evolution in NATURE
  • 2012-05 Hidden treasures in unspliced EST data in THEORY IN BIOSCIENCES
  • 2012 RNA Folding Algorithms with G-Quadruplexes in ADVANCES IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY
  • 2011-12 Fast local fragment chaining using sum-of-pair gap costs in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2011-12 ViennaRNA Package 2.0 in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2011 MicroRNA or Not MicroRNA? in ADVANCES IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY
  • 2011 Phylogenetic Footprinting and Consistent Sets of Local Aligments in COMBINATORIAL PATTERN MATCHING
  • 2010-12 Evolution of metabolic networks: a computational frame-work in JOURNAL OF SYSTEMS CHEMISTRY
  • 2010-12 Bcheck: a wrapper tool for detecting RNase P RNA genes in BMC GENOMICS
  • 2010-12 G-stack modulated probe intensities on expression arrays - sequence corrections and signal calibration in BMC BIOINFORMATICS
  • 2010-04 Nematode sbRNAs: Homologs of Vertebrate Y RNAs in JOURNAL OF MOLECULAR EVOLUTION
  • 2010-03 The primary transcriptome of the major human pathogen Helicobacter pylori in NATURE
  • 2010 Visual Network Analysis of Dynamic Metabolic Pathways in ADVANCES IN VISUAL COMPUTING
  • 2010 Detection of Protein Domains in Eukaryotic Genome Sequences in ADVANCES IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY
  • 2009-05 Hox cluster duplication in the basal teleost Hiodon alosoides (Osteoglossomorpha) in THEORY IN BIOSCIENCES
  • 2008-12 RNAalifold: improved consensus structure prediction for RNA alignments in BMC BIOINFORMATICS
  • 2008-12 Noisy: Identification of problematic columns in multiple sequence alignments in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2008-02 Invertebrate 7SK snRNAs in JOURNAL OF MOLECULAR EVOLUTION
  • 2008-01 Variations on RNA folding and alignment: lessons from Benasque in JOURNAL OF MATHEMATICAL BIOLOGY
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