Eric J Alm

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Eric J



Publications in SciGraph latest 50 shown

  • 2018-12 Predictability and persistence of prebiotic dietary supplementation in a healthy human cohort in SCIENTIFIC REPORTS
  • 2018-12 Random sequences rapidly evolve into de novo promoters in NATURE COMMUNICATIONS
  • 2018-12 High resolution time series reveals cohesive but short-lived communities in coastal plankton in NATURE COMMUNICATIONS
  • 2018-10 Endospores and other lysis-resistant bacteria comprise a widely shared core community within the human microbiota in THE ISME JOURNAL
  • 2018-07 Searching for superstool: maximizing the therapeutic potential of FMT in NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY
  • 2018-05 Metagenomic mining of regulatory elements enables programmable species-selective gene expression in NATURE METHODS
  • 2017-12 Identifying predictive features of Clostridium difficile infection recurrence before, during, and after primary antibiotic treatment in MICROBIOME
  • 2017-12 Meta-analysis of gut microbiome studies identifies disease-specific and shared responses in NATURE COMMUNICATIONS
  • 2017-11 Salt-responsive gut commensal modulates TH17 axis and disease in NATURE
  • 2017-03-22 Corrigendum: Mobile genes in the human microbiome are structured from global to individual scales in NATURE
  • 2017-02-23 Unraveling the processes shaping mammalian gut microbiomes over evolutionary time in NATURE COMMUNICATIONS
  • 2016-12 Erratum to: Host lifestyle affects human microbiota on daily timescales in GENOME BIOLOGY
  • 2016-12 Dysbiosis is not an answer in NATURE MICROBIOLOGY
  • 2016-09-22 Adaptive radiation by waves of gene transfer leads to fine-scale resource partitioning in marine microbes in NATURE COMMUNICATIONS
  • 2016-09 Virtual microfluidics for digital quantification and single-cell sequencing in NATURE METHODS
  • 2016-09 Surveys, simulation and single-cell assays relate function and phylogeny in a lake ecosystem in NATURE MICROBIOLOGY
  • 2016-08 The Microbial Olympics 2016 in NATURE MICROBIOLOGY
  • 2016-07 Mobile genes in the human microbiome are structured from global to individual scales in NATURE
  • 2016-07 Correlation detection strategies in microbial data sets vary widely in sensitivity and precision in THE ISME JOURNAL
  • 2016-02 Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers in THE ISME JOURNAL
  • 2015-10-12 epicPCR (Emulsion, Paired Isolation, and Concatenation PCR) in PROTOCOL EXCHANGE
  • 2015-10 Detection of low-abundance bacterial strains in metagenomic datasets by eigengenome partitioning in NATURE BIOTECHNOLOGY
  • 2015-04 Frozen Encapsulated Stool in Recurrent Clostridium difficile: Exploring the Role of Pills in the Treatment Hierarchy of Fecal Microbiota Transplant Nonresponders in THE AMERICAN JOURNAL OF GASTROENTEROLOGY
  • 2015-04 Ancestral Reconstruction of a Pre-LUCA Aminoacyl-tRNA Synthetase Ancestor Supports the Late Addition of Trp to the Genetic Code in JOURNAL OF MOLECULAR EVOLUTION
  • 2014-09 OpenBiome remains open to serve the medical community in NATURE BIOTECHNOLOGY
  • 2014-07 Host lifestyle affects human microbiota on daily timescales in GENOME BIOLOGY
  • 2014-02-19 Policy: How to regulate faecal transplants in NATURE
  • 2013-03 Reproducibility of Vibrionaceae population structure in coastal bacterioplankton in THE ISME JOURNAL
  • 2013 Reconciliation Revisited: Handling Multiple Optima When Reconciling with Duplication, Transfer, and Loss in RESEARCH IN COMPUTATIONAL MOLECULAR BIOLOGY
  • 2012-12 Shape and evolution of the fundamental niche in marine Vibrio in THE ISME JOURNAL
  • 2012-08 Erratum to: Molecular Evolution of Aminoacyl tRNA Synthetase Proteins in the Early History of Life in ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES
  • 2012-06 A framework for human microbiome research in NATURE
  • 2012-06 Structure, function and diversity of the healthy human microbiome in NATURE
  • 2011-12 Molecular Evolution of Aminoacyl tRNA Synthetase Proteins in the Early History of Life in ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES
  • 2011-12 Ecology drives a global network of gene exchange connecting the human microbiome in NATURE
  • 2011-01-06 Rapid evolutionary innovation during an Archaean genetic expansion in NATURE
  • 2009-10 The slow:fast substitution ratio reveals changing patterns of natural selection in γ-proteobacterial genomes in THE ISME JOURNAL
  • 2006-12 OpWise: Operons aid the identification of differentially expressed genes in bacterial microarray experiments in BMC BIOINFORMATICS
  • 2006-06 The Histidine Operon Is Ancient in JOURNAL OF MOLECULAR EVOLUTION
  • 2004-10 Reconstruction of regulatory and metabolic pathways in metal-reducing δ-proteobacteria in GENOME BIOLOGY
  • 2000-08-01 Critical role of β-hairpin formation in protein G folding in NATURE STRUCTURAL & MOLECULAR BIOLOGY
  • 1999-11-01 Experiment and theory highlight role of native state topology in SH3 folding in NATURE STRUCTURAL & MOLECULAR BIOLOGY
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