Ilya Shmulevich

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Publications in SciGraph latest 50 shown

  • 2020-11-04 Discovery of driver non-coding splice-site-creating mutations in cancer in NATURE COMMUNICATIONS
  • 2018-11-06 Epigenetic profiling for the molecular classification of metastatic brain tumors in NATURE COMMUNICATIONS
  • 2016-11-23 Logic models to predict continuous outputs based on binary inputs with an application to personalized cancer therapy in SCIENTIFIC REPORTS
  • 2015-09-14 A multilevel pan-cancer map links gene mutations to cancer hallmarks in CANCER COMMUNICATIONS
  • 2014-07-23 Comprehensive molecular characterization of gastric adenocarcinoma in NATURE
  • 2014-04-21 Two mature products of MIR-491 coordinate to suppress key cancer hallmarks in glioblastoma in ONCOGENE
  • 2014-04-13 Multiscale Representation of Genomic Signals in NATURE METHODS
  • 2014-03-05 Post-transcriptional regulatory network of epithelial-to-mesenchymal and mesenchymal-to-epithelial transitions in JOURNAL OF HEMATOLOGY & ONCOLOGY
  • 2014-01-29 Comprehensive molecular characterization of urothelial bladder carcinoma in NATURE
  • 2013-12-24 POMO - Plotting Omics analysis results for Multiple Organisms in BMC GENOMICS
  • 2013-09-26 The Cancer Genome Atlas Pan-Cancer analysis project in NATURE GENETICS
  • 2013-05-01 Integrated genomic characterization of endometrial carcinoma in NATURE
  • 2013-04-21 Gene pair signatures in cell type transcriptomes reveal lineage control in NATURE METHODS
  • 2012-10-09 Fastbreak: a tool for analysis and visualization of structural variations in genomic data in EURASIP JOURNAL ON BIOINFORMATICS AND SYSTEMS BIOLOGY
  • 2012-09-08 Structure Learning for Bayesian Networks as Models of Biological Networks in DATA MINING FOR SYSTEMS BIOLOGY
  • 2012-07-18 Comprehensive molecular characterization of human colon and rectal cancer in NATURE
  • 2011-10-24 EPEPT: A web service for enhanced P-value estimation in permutation tests in BMC BIOINFORMATICS
  • 2011 Structure-Dynamics Relationships in Biological Networks in INFORMATION PROCESSING AND BIOLOGICAL SYSTEMS
  • 2010-07-14 SEQADAPT: an adaptable system for the tracking, storage and analysis of high throughput sequencing experiments in BMC BIOINFORMATICS
  • 2010 An Integration Architecture Designed to Deal with the Issues of Biological Scope, Scale and Complexity in DATA INTEGRATION IN THE LIFE SCIENCES
  • 2009-03-23 NGAL decreases E-cadherin-mediated cell–cell adhesion and increases cell motility and invasion through Rac1 in colon carcinoma cells in LABORATORY INVESTIGATION
  • 2009-03-08 Role of the transcription factor C/EBPδ in a regulatory circuit that discriminates between transient and persistent Toll-like receptor 4-induced signals in NATURE IMMUNOLOGY
  • 2009-03-06 Adaptable data management for systems biology investigations in BMC BIOINFORMATICS
  • 2009-02-18 Using cell fate attractors to uncover transcriptional regulation of HL60 neutrophil differentiation in BMC SYSTEMS BIOLOGY
  • 2009 Boolean Modeling of Biological Networks in ENCYCLOPEDIA OF COMPLEXITY AND SYSTEMS SCIENCE
  • 2008-06-25 Systems biology driven software design for the research enterprise in BMC BIOINFORMATICS
  • 2008-05-25 Inference of Boolean Networks Using Sensitivity Regularization in EURASIP JOURNAL ON BIOINFORMATICS AND SYSTEMS BIOLOGY
  • 2008-04-12 Learning the structure of dynamic Bayesian networks from time series and steady state measurements in MACHINE LEARNING
  • 2008-03-05 The Innate Immune Database (IIDB) in BMC IMMUNOLOGY
  • 2007-10-12 ProbCD: enrichment analysis accounting for categorization uncertainty in BMC BIOINFORMATICS
  • 2007-07-11 Simcluster: clustering enumeration gene expression data on the simplex space in BMC BIOINFORMATICS
  • 2007-03-20 Propagating organization: an enquiry in BIOLOGY & PHILOSOPHY
  • 2006-01-01 Inference of Genetic Regulatory Networks via Best-Fit Extensions in COMPUTATIONAL AND STATISTICAL APPROACHES TO GENOMICS
  • 2005-02-02 Insulin-like growth factor binding protein 2 promotes ovarian cancer cell invasion in MOLECULAR CANCER
  • 2004-07-08 Correction of Misclassifications Using a Proximity-Based Estimation Method in EURASIP JOURNAL ON ADVANCES IN SIGNAL PROCESSING
  • 2004-01-21 Genomic Signal Processing: The Salient Issues in EURASIP JOURNAL ON ADVANCES IN SIGNAL PROCESSING
  • 2003-07 On Learning Gene Regulatory Networks Under the Boolean Network Model in MACHINE LEARNING
  • 2003-01-01 Single-Nucleotide Polymorphisms, DNA Repair, and Cancer in COMPUTATIONAL AND STATISTICAL APPROACHES TO GENOMICS
  • 2003-01-01 Inference of Genetic Regulatory Networks Via Best-Fit Extensions in COMPUTATIONAL AND STATISTICAL APPROACHES TO GENOMICS
  • 2003-01-01 Human Glioma Diagnosis from Gene Expression Data in COMPUTATIONAL AND STATISTICAL APPROACHES TO GENOMICS
  • 2002-05 Markov Random Field Modeling in Median Pyramidal Transform Domain for Denoising Applications in JOURNAL OF MATHEMATICAL IMAGING AND VISION
  • 2001-02 Perceptual Issues in Music Pattern Recognition: Complexity of Rhythm and Key Finding in LANGUAGE RESOURCES AND EVALUATION
  • 1998 On the Structure of Idempotent Monotone Boolean Functions in NOBLESSE WORKSHOP ON NON-LINEAR MODEL BASED IMAGE ANALYSIS
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