Laxmi Parida

Ontology type: schema:Person     

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Publications in SciGraph latest 50 shown

  • 2022-05-10 Author Correction: Integrative molecular and clinical profiling of acral melanoma links focal amplification of 22q11.21 to metastasis in NATURE COMMUNICATIONS
  • 2022-03-09 Inferring COVID-19 Biological Pathways from Clinical Phenotypes Via Topological Analysis in AI FOR DISEASE SURVEILLANCE AND PANDEMIC INTELLIGENCE
  • 2022-02-23 Integrative molecular and clinical profiling of acral melanoma links focal amplification of 22q11.21 to metastasis in NATURE COMMUNICATIONS
  • 2021-12-02 Paralog knockout profiling identifies DUSP4 and DUSP6 as a digenic dependence in MAPK pathway-driven cancers in NATURE GENETICS
  • 2021-11-16 A common methodological phylogenomics framework for intra-patient heteroplasmies to infer SARS-CoV-2 sublineages and tumor clones in BMC GENOMICS
  • 2021-06-08 SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment in MICROBIOME
  • 2021-05-13 Challenges in benchmarking metagenomic profilers in NATURE METHODS
  • 2021-03-19 Functional profiling of COVID-19 respiratory tract microbiomes in SCIENTIFIC REPORTS
  • 2021-02-25 Explainable AI reveals changes in skin microbiome composition linked to phenotypic differences in SCIENTIFIC REPORTS
  • 2021-02-08 Monitoring the microbiome for food safety and quality using deep shotgun sequencing in NPJ SCIENCE OF FOOD
  • 2021-01-11 Lies, Gosh Darn Lies, and not enough good statistics: why epidemic model parameter estimation fails in SCIENTIFIC REPORTS
  • 2021-01-09 Re-purposing software for functional characterization of the microbiome in MICROBIOME
  • 2020-04-03 A Topological Data Analysis Approach on Predicting Phenotypes from Gene Expression Data in ALGORITHMS FOR COMPUTATIONAL BIOLOGY
  • 2019-11-19 Food authentication from shotgun sequencing reads with an application on high protein powders in NPJ SCIENCE OF FOOD
  • 2019-11-19 Author Correction: Liquid versus tissue biopsy for detecting acquired resistance and tumor heterogeneity in gastrointestinal cancers in NATURE MEDICINE
  • 2019-09-09 Liquid versus tissue biopsy for detecting acquired resistance and tumor heterogeneity in gastrointestinal cancers in NATURE MEDICINE
  • 2019-08-02 Correction to: Sequencing and curation strategies for identifying candidate glioblastoma treatments in BMC MEDICAL GENOMICS
  • 2019-04-04 Signal enrichment with strain-level resolution in metagenomes using topological data analysis in BMC GENOMICS
  • 2019-02-14 A Quantitative and Qualitative Characterization of k-mer Based Alignment-Free Phylogeny Construction in COMPUTATIONAL INTELLIGENCE METHODS FOR BIOINFORMATICS AND BIOSTATISTICS
  • 2019-02-01 Analysis on GENIE reveals novel recurrent variants that affect molecular diagnosis of sizable number of cancer patients in BMC CANCER
  • 2018-05-09 Efficient algorithms for polyploid haplotype phasing in BMC GENOMICS
  • 2017-10-17 Host Phenotype Prediction from Differentially Abundant Microbes Using RoDEO in COMPUTATIONAL INTELLIGENCE METHODS FOR BIOINFORMATICS AND BIOSTATISTICS
  • 2016-07-19 Does encoding matter? A novel view on the quantitative genetic trait prediction problem in BMC BIOINFORMATICS
  • 2016-01-11 Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis in BMC SYSTEMS BIOLOGY
  • 2015-03-26 Topological Signatures for Population Admixture in RESEARCH IN COMPUTATIONAL MOLECULAR BIOLOGY
  • 2015-03-14 SimBA: simulation algorithm to fit extant-population distributions in BMC BIOINFORMATICS
  • 2015-02-18 Data-driven encoding for quantitative genetic trait prediction in BMC BIOINFORMATICS
  • 2015 Host Trait Prediction of Metagenomic Data for Topology-Based Visualization in DISTRIBUTED COMPUTING AND INTERNET TECHNOLOGY
  • 2014-10-17 Proceedings of The Twelfth Annual RECOMB Comparative Genomics Conference in BMC GENOMICS
  • 2014-10-17 Comparative exomics of Phalariscultivars under salt stress in BMC GENOMICS
  • 2014-09-04 BAC Sequencing Using Pooled Methods in BACTERIAL ARTIFICIAL CHROMOSOMES
  • 2014 Entropic Profiles, Maximal Motifs and the Discovery of Significant Repetitions in Genomic Sequences in ALGORITHMS IN BIOINFORMATICS
  • 2014 Best-Fit in Linear Time for Non-generative Population Simulation in ALGORITHMS IN BIOINFORMATICS
  • 2013-06 The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color in GENOME BIOLOGY
  • 2013-03-05 Ultrametric networks: a new tool for phylogenetic analysis in ALGORITHMS FOR MOLECULAR BIOLOGY
  • 2013-01-21 Sum of parts is greater than the whole: inference of common genetic history of populations in BMC GENOMICS
  • 2013 Genetic History of Populations: Limits to Inference in MODELS AND ALGORITHMS FOR GENOME EVOLUTION
  • 2013 Using Random Graphs in Population Genomics in THE NATURE OF COMPUTATION. LOGIC, ALGORITHMS, APPLICATIONS
  • 2013 IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data in RESEARCH IN COMPUTATIONAL MOLECULAR BIOLOGY
  • 2012-12-19 ARG-based genome-wide analysis of cacao cultivars in BMC BIOINFORMATICS
  • 2012-02-07 Discovering Patterns in Gene Order in EVOLUTIONARY GENOMICS
  • 2012-01-31 Nonredundant Representation of Ancestral Recombinations Graphs in EVOLUTIONARY GENOMICS
  • 2012 Characterization and Extraction of Irredundant Tandem Motifs in STRING PROCESSING AND INFORMATION RETRIEVAL
  • 2011-10-18 Recombination networks as genetic markers in a human variation study of the Old World in HUMAN GENETICS
  • 2011-07-27 Sequencing of a QTL-rich region of the Theobroma cacao genome using pooled BACs and the identification of trait specific candidate genes in BMC GENOMICS
  • 2011-04-15 Assessing pooled BAC and whole genome shotgun strategies for assembly of complex genomes in BMC GENOMICS
  • 2011-02-15 A minimal descriptor of an ancestral recombinations graph in BMC BIOINFORMATICS
  • 2010-10-04 Graph Model of Coalescence with Recombinations in PROBLEM SOLVING HANDBOOK IN COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
  • 2010-01-18 APBC 2010. The Eighth Asia Pacific Bioinformatics Conference Bangalore, India, 18-21 January 2010 in BMC BIOINFORMATICS
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