Edward Charles Holmes


Ontology type: schema:Person     


Person Info

NAME

Edward Charles

SURNAME

Holmes

Publications in SciGraph latest 50 shown

  • 2022-05-18 Co-infection with SARS-CoV-2 Omicron and Delta variants revealed by genomic surveillance in NATURE COMMUNICATIONS
  • 2022-05-10 A total infectome approach to understand the etiology of infectious disease in pigs in MICROBIOME
  • 2022-01-04 Diversity and evolution of the animal virome in NATURE REVIEWS MICROBIOLOGY
  • 2021-07-08 After the pandemic: perspectives on the future trajectory of COVID-19 in NATURE
  • 2021-06-09 SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse in NATURE MICROBIOLOGY
  • 2021-04-16 Field and classroom initiatives for portable sequence-based monitoring of dengue virus in Brazil in NATURE COMMUNICATIONS
  • 2021-01-29 Addendum: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology in NATURE MICROBIOLOGY
  • 2020-12-11 Genomic epidemiology reveals transmission patterns and dynamics of SARS-CoV-2 in Aotearoa New Zealand in NATURE COMMUNICATIONS
  • 2020-12-04 Response to Brinkmann et al. “Re-assembly of 19th century smallpox vaccine genomes reveals the contemporaneous use of horsepox and horsepox-related viruses in the United States” in GENOME BIOLOGY
  • 2020-11-02 Diverse and abundant resistome in terrestrial and aquatic vertebrates revealed by transcriptional analysis in SCIENTIFIC REPORTS
  • 2020-09-28 Identifying the Risk of SARS-CoV-2 Infection and Environmental Monitoring in Airborne Infectious Isolation Rooms (AIIRs) in VIROLOGICA SINICA
  • 2020-09-05 Meta-transcriptomic identification of Trypanosoma spp. in native wildlife species from Australia in PARASITES & VECTORS
  • 2020-07-20 The origins and genomic diversity of American Civil War Era smallpox vaccine strains in GENOME BIOLOGY
  • 2020-07-15 A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology in NATURE MICROBIOLOGY
  • 2020-07-09 Revealing COVID-19 transmission in Australia by SARS-CoV-2 genome sequencing and agent-based modeling in NATURE MEDICINE
  • 2020-04-28 CCMetagen: comprehensive and accurate identification of eukaryotes and prokaryotes in metagenomic data in GENOME BIOLOGY
  • 2020-04-14 Sustained RNA virome diversity in Antarctic penguins and their ticks in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • 2020-04-02 Author Correction: A new coronavirus associated with human respiratory disease in China in NATURE
  • 2020-03-26 Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins in NATURE
  • 2020-03-17 The proximal origin of SARS-CoV-2 in NATURE MEDICINE
  • 2020-03-03 High resolution metagenomic characterization of complex infectomes in paediatric acute respiratory infection in SCIENTIFIC REPORTS
  • 2020-02-27 The use of taxon-specific reference databases compromises metagenomic classification in BMC GENOMICS
  • 2020-02-18 We shouldn’t worry when a virus mutates during disease outbreaks in NATURE MICROBIOLOGY
  • 2020-02-03 A new coronavirus associated with human respiratory disease in China in NATURE
  • 2019-12-31 Origin of the São Paulo Yellow Fever epidemic of 2017–2018 revealed through molecular epidemiological analysis of fatal cases in SCIENTIFIC REPORTS
  • 2019-12-12 Metagenomic discovery and co-infection of diverse wobbly possum disease viruses and a novel hepacivirus in Australian brushtail possums in ONE HEALTH OUTLOOK
  • 2019-09-11 Epidemiology and Diversity of Rickettsiales Bacteria in Humans and Animals in Jiangsu and Jiangxi provinces, China in SCIENTIFIC REPORTS
  • 2019-08-12 Reply to ‘Reconciling disparate estimates of viral genetic diversity during human influenza infections’ in NATURE GENETICS
  • 2019-08-08 Metatranscriptomics as a tool to identify fungal species and subspecies in mixed communities – a proof of concept under laboratory conditions in IMA FUNGUS
  • 2019-06-25 Virome heterogeneity and connectivity in waterfowl and shorebird communities in THE ISME JOURNAL: MULTIDISCIPLINARY JOURNAL OF MICROBIAL ECOLOGY
  • 2019-04-08 Meta-transcriptomics reveals a diverse antibiotic resistance gene pool in avian microbiomes in BMC BIOLOGY
  • 2019-02-27 Evolutionary stasis of viruses? in NATURE REVIEWS MICROBIOLOGY
  • 2018-12-13 Tracking virus outbreaks in the twenty-first century in NATURE MICROBIOLOGY
  • 2018-10-10 The phylogenomics of evolving virus virulence in NATURE REVIEWS GENETICS
  • 2018-06-26 Author Correction: The evolutionary history of vertebrate RNA viruses in NATURE
  • 2018-06-25 The Biological Object Notation (BON): a structured file format for biological data in SCIENTIFIC REPORTS
  • 2018-06-07 Pandemics: spend on surveillance, not prediction in NATURE
  • 2018-05-10 Publisher Correction: Sudden emergence of human infections with H7N9 avian influenza A virus in Hubei province, central China in SCIENTIFIC REPORTS
  • 2018-04-04 The evolutionary history of vertebrate RNA viruses in NATURE
  • 2018-02-06 Sudden emergence of human infections with H7N9 avian influenza A virus in Hubei province, central China in SCIENTIFIC REPORTS
  • 2017-09-07 Characterizing the virome of Ixodes ricinus ticks from northern Europe in SCIENTIFIC REPORTS
  • 2017-05-25 The impact of migratory flyways on the spread of avian influenza virus in North America in BMC ECOLOGY AND EVOLUTION
  • 2017-05-24 Establishment and cryptic transmission of Zika virus in Brazil and the Americas in NATURE
  • 2017-04-12 Virus genomes reveal factors that spread and sustained the Ebola epidemic in NATURE
  • 2017-03-08 Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus in NATURE
  • 2016-12-09 Extensive genetic diversity of Rickettsiales bacteria in multiple mosquito species in SCIENTIFIC REPORTS
  • 2016-12-08 Cyprinid herpesvirus 3 and its evolutionary future as a biological control agent for carp in Australia in VIROLOGY JOURNAL
  • 2016-11-23 Redefining the invertebrate RNA virosphere in NATURE
  • 2016-10-12 The evolution of Ebola virus: Insights from the 2013–2016 epidemic in NATURE
  • 2016-05-26 Cross-validation to select Bayesian hierarchical models in phylogenetics in BMC ECOLOGY AND EVOLUTION
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