Steven Lloyd Salzberg


Ontology type: schema:Person     


Person Info

NAME

Steven Lloyd

SURNAME

Salzberg

Publications in SciGraph latest 50 shown

  • 2022-04-19 High-quality genome and methylomes illustrate features underlying evolutionary success of oaks in NATURE COMMUNICATIONS
  • 2020-08-28 Ultrafast and accurate 16S rRNA microbial community analysis using Kraken 2 in MICROBIOME
  • 2020-08-18 Publisher Correction: The tuatara genome reveals ancient features of amniote evolution in NATURE
  • 2020-08-05 The tuatara genome reveals ancient features of amniote evolution in NATURE
  • 2020-06-02 Assembly and annotation of an Ashkenazi human reference genome in GENOME BIOLOGY
  • 2020-05-12 Terminating contamination: large-scale search identifies more than 2,000,000 contaminated entries in GenBank in GENOME BIOLOGY
  • 2020-02-07 Pan-genomics in the human genome era in NATURE REVIEWS GENETICS
  • 2019-12-16 Transcriptome assembly from long-read RNA-seq alignments with StringTie2 in GENOME BIOLOGY
  • 2019-09-04 Author Correction: Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations in NATURE COMMUNICATIONS
  • 2019-08-02 Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype in NATURE BIOTECHNOLOGY
  • 2019-05-16 Next-generation genome annotation: we still struggle to get it right in GENOME BIOLOGY
  • 2019-02-20 Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations in NATURE COMMUNICATIONS
  • 2019-01-15 Author Correction: Assembly of a pan-genome from deep sequencing of 910 humans of African descent in NATURE GENETICS
  • 2018-11-28 CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise in GENOME BIOLOGY
  • 2018-11-19 Assembly of a pan-genome from deep sequencing of 910 humans of African descent in NATURE GENETICS
  • 2018-11-16 KrakenUniq: confident and fast metagenomics classification using unique k-mer counts in GENOME BIOLOGY
  • 2018-08-20 Open questions: How many genes do we have? in BMC BIOLOGY
  • 2017-11-01 Genome sequence of the progenitor of the wheat D genome Aegilops tauschii in NATURE
  • 2017-05-08 Horizontal gene transfer is not a hallmark of the human genome in GENOME BIOLOGY
  • 2016-08-11 Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown in NATURE PROTOCOLS
  • 2016-05-11 Reminder to deposit DNA sequences in NATURE
  • 2015-11-03 Use and mis-use of supplementary material in science publications in BMC BIOINFORMATICS
  • 2015-04-24 The genomes of two key bumblebee species with primitive eusocial organization in GENOME BIOLOGY
  • 2015-03-09 HISAT: a fast spliced aligner with low memory requirements in NATURE METHODS
  • 2015-03-06 Ballgown bridges the gap between transcriptome assembly and expression analysis in NATURE BIOTECHNOLOGY
  • 2015-02-18 StringTie enables improved reconstruction of a transcriptome from RNA-seq reads in NATURE BIOTECHNOLOGY
  • 2015-01-07 Broad CTL response is required to clear latent HIV-1 due to dominance of escape mutations in NATURE
  • 2014-10-14 A new rhesus macaque assembly and annotation for next-generation sequencing analyses in BIOLOGY DIRECT
  • 2014-09-25 Erratum: Corrigendum: Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks in NATURE PROTOCOLS
  • 2014-03-04 Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies in GENOME BIOLOGY
  • 2014-03-03 Kraken: ultrafast metagenomic sequence classification using exact alignments in GENOME BIOLOGY
  • 2013-06-24 Open access to tree genomes: the path to a better forest in GENOME BIOLOGY
  • 2013-04-25 TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions in GENOME BIOLOGY
  • 2013-03-27 Sequestration: inadvertently killing biomedical research to score political points in GENOME BIOLOGY
  • 2013-01-02 NIH funding: It does support innovators in NATURE
  • 2012-10-30 Thousands of missed genes found in bacterial genomes and their analysis with COMBREX in BIOLOGY DIRECT
  • 2012-06 The Perils of Gene Patents in CLINICAL PHARMACOLOGY & THERAPEUTICS
  • 2012-03-04 Fast gapped-read alignment with Bowtie 2 in NATURE METHODS
  • 2012-03-01 Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks in NATURE PROTOCOLS
  • 2012-01-17 Erratum: Repetitive DNA and next-generation sequencing: computational challenges and solutions in NATURE REVIEWS GENETICS
  • 2011-11-29 Repetitive DNA and next-generation sequencing: computational challenges and solutions in NATURE REVIEWS GENETICS
  • 2011-08-11 TopHat-Fusion: an algorithm for discovery of novel fusion transcripts in GENOME BIOLOGY
  • 2011-07-04 Detection of lineage-specific evolutionary changes among primate species in BMC BIOINFORMATICS
  • 2011-06-30 Improving pan-genome annotation using whole genome multiple alignment in BMC BIOINFORMATICS
  • 2011-05-31 Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths in GENOME BIOLOGY
  • 2011-04-28 PhymmBL expanded: confidence scores, custom databases, parallelization and more in NATURE METHODS
  • 2010-12-26 The genome of woodland strawberry (Fragaria vesca) in NATURE GENETICS
  • 2010-11-29 Quake: quality-aware detection and correction of sequencing errors in GENOME BIOLOGY
  • 2010-11-02 Clustering metagenomic sequences with interpolated Markov models in BMC BIOINFORMATICS
  • 2010-10-11 Between a chicken and a grape: estimating the number of human genes in GENOME BIOLOGY
  • JSON-LD is the canonical representation for SciGraph data.

    TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

    [
      {
        "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
        "affiliation": [
          {
            "affiliation": {
              "id": "http://www.grid.ac/institutes/grid.21107.35", 
              "type": "Organization"
            }, 
            "isCurrent": true, 
            "type": "OrganizationRole"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.454841.8", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.189504.1", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.16750.35", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.8756.c", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.1006.7", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.419234.9", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.19006.3e", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.5170.3", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.7445.2", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.164295.d", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.27860.3b", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.5645.2", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.469946.0", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.410443.6", 
            "type": "Organization"
          }, 
          {
            "id": "http://www.grid.ac/institutes/grid.411024.2", 
            "type": "Organization"
          }
        ], 
        "familyName": "Salzberg", 
        "givenName": "Steven Lloyd", 
        "id": "sg:person.01223441713.02", 
        "identifier": [
          {
            "name": "orcid_id", 
            "type": "PropertyValue", 
            "value": "0000-0002-8859-7432"
          }
        ], 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01223441713.02", 
          "https://orcid.org/0000-0002-8859-7432"
        ], 
        "sdDataset": "persons", 
        "sdDatePublished": "2022-08-04T17:38", 
        "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
        "sdPublisher": {
          "name": "Springer Nature - SN SciGraph project", 
          "type": "Organization"
        }, 
        "sdSource": "s3://com-springernature-scigraph/baseset/20220804/entities/gbq_results/person/person_726.jsonl", 
        "type": "Person"
      }
    ]
     

    Download the RDF metadata as:  json-ld nt turtle xml License info

    HOW TO GET THIS DATA PROGRAMMATICALLY:

    JSON-LD is a popular format for linked data which is fully compatible with JSON.

    curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/person.01223441713.02'

    N-Triples is a line-based linked data format ideal for batch operations.

    curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/person.01223441713.02'

    Turtle is a human-readable linked data format.

    curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/person.01223441713.02'

    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/person.01223441713.02'


     

    This table displays all metadata directly associated to this object as RDF triples.

    51 TRIPLES      11 PREDICATES      28 URIs      8 LITERALS      3 BLANK NODES

    Subject Predicate Object
    1 sg:person.01223441713.02 schema:affiliation Nce215454df7d41e795f80cc27d3bd3ba
    2 grid-institutes:grid.1006.7
    3 grid-institutes:grid.164295.d
    4 grid-institutes:grid.16750.35
    5 grid-institutes:grid.189504.1
    6 grid-institutes:grid.19006.3e
    7 grid-institutes:grid.27860.3b
    8 grid-institutes:grid.410443.6
    9 grid-institutes:grid.411024.2
    10 grid-institutes:grid.419234.9
    11 grid-institutes:grid.454841.8
    12 grid-institutes:grid.469946.0
    13 grid-institutes:grid.5170.3
    14 grid-institutes:grid.5645.2
    15 grid-institutes:grid.7445.2
    16 grid-institutes:grid.8756.c
    17 schema:familyName Salzberg
    18 schema:givenName Steven Lloyd
    19 schema:identifier N90e90050e83a4647bdecd5b298821aa9
    20 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01223441713.02
    21 https://orcid.org/0000-0002-8859-7432
    22 schema:sdDatePublished 2022-08-04T17:38
    23 schema:sdLicense https://scigraph.springernature.com/explorer/license/
    24 schema:sdPublisher Ne1b2e1d85ff244279156b1b922d12a7b
    25 sgo:license sg:explorer/license/
    26 sgo:sdDataset persons
    27 rdf:type schema:Person
    28 N90e90050e83a4647bdecd5b298821aa9 schema:name orcid_id
    29 schema:value 0000-0002-8859-7432
    30 rdf:type schema:PropertyValue
    31 Nce215454df7d41e795f80cc27d3bd3ba schema:affiliation grid-institutes:grid.21107.35
    32 sgo:isCurrent true
    33 rdf:type schema:OrganizationRole
    34 Ne1b2e1d85ff244279156b1b922d12a7b schema:name Springer Nature - SN SciGraph project
    35 rdf:type schema:Organization
    36 grid-institutes:grid.1006.7 schema:Organization
    37 grid-institutes:grid.164295.d schema:Organization
    38 grid-institutes:grid.16750.35 schema:Organization
    39 grid-institutes:grid.189504.1 schema:Organization
    40 grid-institutes:grid.19006.3e schema:Organization
    41 grid-institutes:grid.21107.35 schema:Organization
    42 grid-institutes:grid.27860.3b schema:Organization
    43 grid-institutes:grid.410443.6 schema:Organization
    44 grid-institutes:grid.411024.2 schema:Organization
    45 grid-institutes:grid.419234.9 schema:Organization
    46 grid-institutes:grid.454841.8 schema:Organization
    47 grid-institutes:grid.469946.0 schema:Organization
    48 grid-institutes:grid.5170.3 schema:Organization
    49 grid-institutes:grid.5645.2 schema:Organization
    50 grid-institutes:grid.7445.2 schema:Organization
    51 grid-institutes:grid.8756.c schema:Organization
     




    Preview window. Press ESC to close (or click here)


    ...