Steven L Salzberg


Ontology type: schema:Person     


Person Info

NAME

Steven L

SURNAME

Salzberg

Publications in SciGraph latest 50 shown

  • 2018-12 CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise in GENOME BIOLOGY
  • 2018-12 Open questions: How many genes do we have? in BMC BIOLOGY
  • 2018-12 KrakenUniq: confident and fast metagenomics classification using unique k-mer counts in GENOME BIOLOGY
  • 2017-12 Horizontal gene transfer is not a hallmark of the human genome in GENOME BIOLOGY
  • 2017-11 Genome sequence of the progenitor of the wheat D genome Aegilops tauschii in NATURE
  • 2016-08-11 Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown in NATURE PROTOCOLS
  • 2016-05 Databases: Reminder to deposit DNA sequences in NATURE
  • 2015-12 Use and mis-use of supplementary material in science publications in BMC BIOINFORMATICS
  • 2015-12 The genomes of two key bumblebee species with primitive eusocial organization in GENOME BIOLOGY
  • 2015-04 HISAT: a fast spliced aligner with low memory requirements in NATURE METHODS
  • 2015-03 Ballgown bridges the gap between transcriptome assembly and expression analysis in NATURE BIOTECHNOLOGY
  • 2015-03 StringTie enables improved reconstruction of a transcriptome from RNA-seq reads in NATURE BIOTECHNOLOGY
  • 2015-01 Broad CTL response is required to clear latent HIV-1 due to dominance of escape mutations in NATURE
  • 2014-12 A new rhesus macaque assembly and annotation for next-generation sequencing analyses in BIOLOGY DIRECT
  • 2014-10 Corrigendum: Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks in NATURE PROTOCOLS
  • 2014-03 Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies in GENOME BIOLOGY
  • 2014-03 Kraken: ultrafast metagenomic sequence classification using exact alignments in GENOME BIOLOGY
  • 2013-06 Open access to tree genomes: the path to a better forest in GENOME BIOLOGY
  • 2013-04 TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions in GENOME BIOLOGY
  • 2013-03 Sequestration: inadvertently killing biomedical research to score political points in GENOME BIOLOGY
  • 2013-01-02 NIH funding: It does support innovators in NATURE
  • 2012-12 Thousands of missed genes found in bacterial genomes and their analysis with COMBREX in BIOLOGY DIRECT
  • 2012-11 Genome interpretation and assembly—recent progress and next steps in NATURE BIOTECHNOLOGY
  • 2012-07 Butterfly genome reveals promiscuous exchange of mimicry adaptations among species in NATURE
  • 2012-06 The Perils of Gene Patents in CLINICAL PHARMACOLOGY & THERAPEUTICS
  • 2012-04 Fast gapped-read alignment with Bowtie 2 in NATURE METHODS
  • 2012-03-01 Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks in NATURE PROTOCOLS
  • 2012-02 Repetitive DNA and next-generation sequencing: computational challenges and solutions in NATURE REVIEWS GENETICS
  • 2012-01 Repetitive DNA and next-generation sequencing: computational challenges and solutions in NATURE REVIEWS GENETICS
  • 2011-12 Detection of lineage-specific evolutionary changes among primate species in BMC BIOINFORMATICS
  • 2011-12 Improving pan-genome annotation using whole genome multiple alignment in BMC BIOINFORMATICS
  • 2011-08 TopHat-Fusion: an algorithm for discovery of novel fusion transcripts in GENOME BIOLOGY
  • 2011-05 PhymmBL expanded: confidence scores, custom databases, parallelization and more in NATURE METHODS
  • 2011-05 Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths in GENOME BIOLOGY
  • 2011-02 The genome of woodland strawberry (Fragaria vesca) in NATURE GENETICS
  • 2010-12 Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification in BMC GENOMICS
  • 2010-12 Clustering metagenomic sequences with interpolated Markov models in BMC BIOINFORMATICS
  • 2010-11 Quake: quality-aware detection and correction of sequencing errors in GENOME BIOLOGY
  • 2010-11 Between a chicken and a grape: estimating the number of human genes in GENOME BIOLOGY
  • 2010-11 Genes and genomes, an imperfect world: comparison of gene annotations of two Bos taurus draft assemblies in GENOME BIOLOGY
  • 2010-10 Do-it-yourself genetic testing in GENOME BIOLOGY
  • 2010-07 Cloud computing and the DNA data race in NATURE BIOTECHNOLOGY
  • 2010-05 Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation in NATURE BIOTECHNOLOGY
  • 2010-05 Between a chicken and a grape: estimating the number of human genes in GENOME BIOLOGY
  • 2010-03 Detection and correction of false segmental duplications caused by genome mis-assembly in GENOME BIOLOGY
  • 2010-02 Mind the gaps in NATURE METHODS
  • 2010 Between a chicken and a grape: estimating the number of human genes in GENOME BIOLOGY
  • 2009-12 Efficient oligonucleotide probe selection for pan-genomic tiling arrays in BMC BIOINFORMATICS
  • 2009-11 Searching for SNPs with cloud computing in GENOME BIOLOGY
  • 2009-09 Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models in NATURE METHODS
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