Chad Nusbaum


Ontology type: schema:Person     


Person Info

NAME

Chad

SURNAME

Nusbaum

Publications in SciGraph latest 50 shown

  • 2018-12 Methods for high-dimensional analysis of cells dissociated from cryopreserved synovial tissue in ARTHRITIS RESEARCH & THERAPY
  • 2016-12 Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq in EPIGENETICS & CHROMATIN
  • 2016-02-22 Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts in NATURE COMMUNICATIONS
  • 2015-11 Mitochondrial genome sequences reveal evolutionary relationships of the Phytophthora 1c clade species in CURRENT GENETICS
  • 2014-12 Comprehensive variation discovery in single human genomes in NATURE GENETICS
  • 2013-12 Semiconductor-based DNA sequencing of histone modification states in NATURE COMMUNICATIONS
  • 2013-12 The Capsaspora genome reveals a complex unicellular prehistory of animals in NATURE COMMUNICATIONS
  • 2013-05 Characterizing and measuring bias in sequence data in GENOME BIOLOGY
  • 2013-03 Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing in NATURE GENETICS
  • 2013-02 Premetazoan genome evolution and the regulation of cell differentiation in the choanoflagellate Salpingoeca rosetta in GENOME BIOLOGY
  • 2012-12 Pacific biosciences sequencing technology for genotyping and variation discovery in human data in BMC GENOMICS
  • 2012-12 How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes? in BMC GENOMICS
  • 2012-06 Structure, function and diversity of the healthy human microbiome in NATURE
  • 2012-06 A framework for human microbiome research in NATURE
  • 2012-04 Genome-wide identification and characterization of replication origins by deep sequencing in GENOME BIOLOGY
  • 2012-03 Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes in GENOME BIOLOGY
  • 2011-12 RNA-Seq methods for imperfect samples: development, evaluation and applications in GENOME BIOLOGY
  • 2011-12 RNA-Seq methods for imperfect samples: development, evaluation and applications in GENOME BIOLOGY
  • 2011-10 A high-resolution map of human evolutionary constraint using 29 mammals in NATURE
  • 2011-08 Hybrid selection for sequencing pathogen genomes from clinical samples in GENOME BIOLOGY
  • 2011-07 Full-length transcriptome assembly from RNA-Seq data without a reference genome in NATURE BIOTECHNOLOGY
  • 2011-05 Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells in NATURE BIOTECHNOLOGY
  • 2011-04 Erratum to: Closing gaps in the human genome using sequencing by synthesis in GENOME BIOLOGY
  • 2011-02 Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries in GENOME BIOLOGY
  • 2011-01 A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries in GENOME BIOLOGY
  • 2010-11 Development and evaluation of RNA-seq methods in GENOME BIOLOGY
  • 2010-11 Evaluation of bacterial ribosomal RNA (rRNA) depletion methods for sequencing microbial community transcriptomes in GENOME BIOLOGY
  • 2010-11 Transcriptomics in a high throughput world in GENOME BIOLOGY
  • 2010-11 Sensitive population profiling and genome assembly of HIV and Flaviviruses using ultra-deep sequencing technologies in GENOME BIOLOGY
  • 2010-11 Analyzing and minimizing bias in Illumina sequencing libraries in GENOME BIOLOGY
  • 2010-09 Comprehensive comparative analysis of strand-specific RNA sequencing methods in NATURE METHODS
  • 2010-08 Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species in GENOME BIOLOGY
  • 2010-07 Corrigendum: Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs in NATURE BIOTECHNOLOGY
  • 2010-05 Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs in NATURE BIOTECHNOLOGY
  • 2010-02 A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454 in GENOME BIOLOGY
  • 2010 Evaluation of bacterial ribosomal RNA (rRNA) depletion methods for sequencing microbial community transcriptomes in GENOME BIOLOGY
  • 2009-10 Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts in GENOME BIOLOGY
  • 2009-10 P09-20 LB. Ultra-deep sequencing of full-length HIV-1 genomes identifies rapid viral evolution during acute infection in RETROVIROLOGY
  • 2009-10 ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads in GENOME BIOLOGY
  • 2009-09 Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans in NATURE
  • 2009-06 Closing gaps in the human genome using sequencing by synthesis in GENOME BIOLOGY
  • 2009-02 Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing in NATURE BIOTECHNOLOGY
  • 2009-01 High-resolution mapping of copy-number alterations with massively parallel sequencing in NATURE METHODS
  • 2009-01 Sensitive, specific polymorphism discovery in bacteria using massively parallel sequencing in NATURE METHODS
  • 2008-12 Short-term genome evolution of Listeria monocytogenes in a non-controlled environment in BMC GENOMICS
  • 2008-11 Model-based Analysis of ChIP-Seq (MACS) in GENOME BIOLOGY
  • 2008-08 Genome-scale DNA methylation maps of pluripotent and differentiated cells in NATURE
  • 2007-08 Genome-wide maps of chromatin state in pluripotent and lineage-committed cells in NATURE
  • 2006-11 Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis in NATURE
  • 2006-04 DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage in NATURE
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