Masaru Tomita

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Publications in SciGraph latest 50 shown

  • 2018-12 Effect of storage conditions on salivary polyamines quantified via liquid chromatography-mass spectrometry in SCIENTIFIC REPORTS
  • 2018-12 Thymidine catabolism promotes NADPH oxidase-derived reactive oxygen species (ROS) signalling in KB and yumoto cells in SCIENTIFIC REPORTS
  • 2018-12 Far rapid synthesis of giant DNA in the Bacillus subtilis genome by a conjugation transfer system in SCIENTIFIC REPORTS
  • 2018-12 MICOP: Maximal information coefficient-based oscillation prediction to detect biological rhythms in proteomics data in BMC BIOINFORMATICS
  • 2018-12 Drying and extraction effects on three edible brown seaweeds for metabolomics in JOURNAL OF APPLIED PHYCOLOGY
  • 2018-06-30 High-Quality Overlapping Paired-End Reads for the Detection of A-to-I Editing on Small RNA in MIRNA BIOGENESIS
  • 2017-12 Comparative genomic analysis of Clostridium difficile ribotype 027 strains including the newly sequenced strain NCKUH-21 isolated from a patient in Taiwan in GUT PATHOGENS
  • 2017-12 An archaeal RNA binding protein, FAU-1, is a novel ribonuclease related to rRNA stability in Pyrococcus and Thermococcus in SCIENTIFIC REPORTS
  • 2017-12 eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria in BMC GENOMICS
  • 2017-12 Eggshell membrane powder ameliorates intestinal inflammation by facilitating the restitution of epithelial injury and alleviating microbial dysbiosis in SCIENTIFIC REPORTS
  • 2016-12 De novo assembly and comparative transcriptome analysis of Euglena gracilis in response to anaerobic conditions in BMC GENOMICS
  • 2016-11 Identification of salivary metabolomic biomarkers for oral cancer screening in SCIENTIFIC REPORTS
  • 2016-08-16 Genome sequencing of a single tardigrade Hypsibius dujardini individual in SCIENTIFIC DATA
  • 2016-07 Erratum to: Metabolomic profiling reveals novel biomarkers of alcohol intake and alcohol-induced liver injury in community-dwelling men in ENVIRONMENTAL HEALTH AND PREVENTIVE MEDICINE
  • 2016-01-20 Conversion of graded phosphorylation into switch-like nuclear translocation via autoregulatory mechanisms in ERK signalling in NATURE COMMUNICATIONS
  • 2016-01 Metabolomic profiling reveals novel biomarkers of alcohol intake and alcohol-induced liver injury in community-dwelling men in ENVIRONMENTAL HEALTH AND PREVENTIVE MEDICINE
  • 2015-12 Precise mapping and dynamics of tRNA-derived fragments (tRFs) in the development of Triops cancriformis (tadpole shrimp) in BMC GENETICS
  • 2015-11 The application of omics technologies in the functional evaluation of inulin and inulin-containing prebiotics dietary supplementation in NUTRITION & DIABETES
  • 2015-11 Metabolomic alterations in human cancer cells by vitamin C-induced oxidative stress in SCIENTIFIC REPORTS
  • 2015-09 Method of preparing an equimolar DNA mixture for one-step DNA assembly of over 50 fragments in SCIENTIFIC REPORTS
  • 2015-05 Transcriptome-wide Variability in Single Embryonic Development Cells in SCIENTIFIC REPORTS
  • 2014-12 Global metabolic network reorganization by adaptive mutations allows fast growth of Escherichia coli on glycerol in NATURE COMMUNICATIONS
  • 2014-12 Effect of codon adaptation on codon-level and gene-level translation efficiency in vivo in BMC GENOMICS
  • 2014-04 Metabolomic profiling of sodium fluoride-induced cytotoxicity in an oral squamous cell carcinoma cell line in METABOLOMICS
  • 2013-12 GEMBASSY: an EMBOSS associated software package for comprehensive genome analyses in SOURCE CODE FOR BIOLOGY AND MEDICINE
  • 2013-12 A systems biology approach to suppress TNF-induced proinflammatory gene expressions in CELL COMMUNICATION AND SIGNALING
  • 2013-09 Contribution of quantitative changes in individual ionic current systems to the embryonic development of ventricular myocytes: a simulation study in THE JOURNAL OF PHYSIOLOGICAL SCIENCES
  • 2013-04 Physiological and environmental parameters associated with mass spectrometry-based salivary metabolomic profiles in METABOLOMICS
  • 2013-04 Metabolomic profiling of lung and prostate tumor tissues by capillary electrophoresis time-of-flight mass spectrometry in METABOLOMICS
  • 2013-03 Metabolic and morphological changes of an oil accumulating trebouxiophycean alga in nitrogen-deficient conditions in METABOLOMICS
  • 2013-02 Metabolomic study of Chilean biomining bacteria Acidithiobacillus ferrooxidans strain Wenelen and Acidithiobacillus thiooxidans strain Licanantay in METABOLOMICS
  • 2013 Merging Multiple Omics Datasets In Silico: Statistical Analyses and Data Interpretation in SYSTEMS METABOLIC ENGINEERING
  • 2013 Modeling of Hsp70-Mediated Protein Refolding in E-CELL SYSTEM
  • 2013 Distributed Cell Biology Simulations with the E-Cell System in E-CELL SYSTEM
  • 2013 Introduction to Whole Cell Modeling in E-CELL SYSTEM
  • 2013 Decoding the Signaling Mechanism of Toll-Like Receptor 4 Pathways in Wild Type and Knockouts in E-CELL SYSTEM
  • 2013 Simulation of Human Erythrocyte Metabolism in E-CELL SYSTEM
  • 2013-01 Identification of a replication initiation protein of the pVV8 plasmid from Thermus thermophilus HB8 in EXTREMOPHILES
  • 2013 A Computational Model of the Hepatic Lobule in E-CELL SYSTEM
  • 2013 Foundations of E-Cell Simulation Environment Architecture in E-CELL SYSTEM
  • 2013 A Guide to Modeling Reaction-Diffusion of Molecules with the E-Cell System in E-CELL SYSTEM
  • 2013 Dynamic Kinetic Modeling of Mitochondrial Energy Metabolism in E-CELL SYSTEM
  • 2013 Electrophysiological Simulation of Developmental Changes in Action Potentials of Cardiomyocytes in E-CELL SYSTEM
  • 2013 A Model Library of Bacterial Chemotaxis on E-Cell System in E-CELL SYSTEM
  • 2012-12 A medium-chain fatty acid as an alternative energy source in mouse preimplantation development in SCIENTIFIC REPORTS
  • 2012-12 Prediction of axillary lymph node metastasis in primary breast cancer patients using a decision tree-based model in BMC MEDICAL INFORMATICS AND DECISION MAKING
  • 2012-12 Metabolic profiling reveals new serum biomarkers for differentiating diabetic nephropathy in ANALYTICAL AND BIOANALYTICAL CHEMISTRY
  • 2012-08 Non-targeted metabolite profiling in activated macrophage secretion in METABOLOMICS
  • 2012-07 Predictions of the pathological response to neoadjuvant chemotherapy in patients with primary breast cancer using a data mining technique in BREAST CANCER RESEARCH AND TREATMENT
  • 2012-03 The third plasmid pVV8 from Thermus thermophilus HB8: isolation, characterization, and sequence determination in EXTREMOPHILES
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