Christine A Orengo


Ontology type: schema:Person     


Person Info

NAME

Christine A

SURNAME

Orengo

Publications in SciGraph latest 50 shown

  • 2019-12 A CATH domain functional family based approach to identify putative cancer driver genes and driver mutations in SCIENTIFIC REPORTS
  • 2018-09-27 Exploring Enzyme Evolution from Changes in Sequence, Structure, and Function in COMPUTATIONAL METHODS IN PROTEIN EVOLUTION
  • 2017-12 Genome-wide RNA-Sequencing analysis identifies a distinct fibrosis gene signature in the conjunctiva after glaucoma surgery in SCIENTIFIC REPORTS
  • 2017-12 Structural and Functional View of Polypharmacology in SCIENTIFIC REPORTS
  • 2017 CATH-Gene3D: Generation of the Resource and Its Use in Obtaining Structural and Functional Annotations for Protein Sequences in PROTEIN BIOINFORMATICS
  • 2017 The Classification of Protein Domains in BIOINFORMATICS
  • 2017 Function Diversity Within Folds and Superfamilies in FROM PROTEIN STRUCTURE TO FUNCTION WITH BIOINFORMATICS
  • 2016-12 An expanded evaluation of protein function prediction methods shows an improvement in accuracy in GENOME BIOLOGY
  • 2015-12 Identifying and characterising key alternative splicing events in Drosophila development in BMC GENOMICS
  • 2015-12 Co-Expression Network Models Suggest that Stress Increases Tolerance to Mutations in SCIENTIFIC REPORTS
  • 2014-12 Crystal structures of the human Dysferlin inner DysF domain in BMC STRUCTURAL BIOLOGY
  • 2014-12 A comparison of RNA-seq and exon arrays for whole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat in MOLECULAR PAIN
  • 2014 Target Selection for Structural Genomics of Infectious Diseases in STRUCTURAL GENOMICS AND DRUG DISCOVERY
  • 2013-03 A large-scale evaluation of computational protein function prediction in NATURE METHODS
  • 2013-02 Protein function prediction using domain families in BMC BIOINFORMATICS
  • 2013 Domain Structure Classifications in ENCYCLOPEDIA OF BIOPHYSICS
  • 2012-12 ReadqPCR and NormqPCR: R packages for the reading, quality checking and normalisation of RT-qPCR quantification cycle (Cq) data in BMC GENOMICS
  • 2011-12 1,000 structures and more from the MCSG in BMC STRUCTURAL BIOLOGY
  • 2011-12 Characterization of pathogenic germline mutations in human Protein Kinases in BMC BIOINFORMATICS
  • 2011-03-29 Exploiting Protein Structures to Predict Protein Functions in PROTEIN FUNCTION PREDICTION FOR OMICS ERA
  • 2010-12 Comparative evolutionary analysis of protein complexes in E. coli and yeast in BMC GENOMICS
  • 2009-08 An integrated approach to the interpretation of Single Amino Acid Polymorphisms within the framework of CATH and Gene3D in BMC BIOINFORMATICS
  • 2009-04 Structural genomics is the largest contributor of novel structural leverage in JOURNAL OF STRUCTURAL AND FUNCTIONAL GENOMICS
  • 2009-02 Protein function annotation by homology-based inference in GENOME BIOLOGY
  • 2009 Function Diversity Within Folds and Superfamilies in FROM PROTEIN STRUCTURE TO FUNCTION WITH BIOINFORMATICS
  • 2008-08-22 Assessing functional novelty of PSI structures via structure-function analysis of large and diverse superfamilies in NATURE PRECEDINGS
  • 2008 Structure to function in MODERN GENOME ANNOTATION
  • 2008 Modern genome annotation: the BioSapiens network in MODERN GENOME ANNOTATION
  • 2008 Target Selection for Structural Genomics: An Overview in STRUCTURAL PROTEOMICS
  • 2008 The Classification of Protein Domains in BIOINFORMATICS
  • 2007-12 Establishing a major cause of discrepancy in the calibration of Affymetrix GeneChips in BMC BIOINFORMATICS
  • 2007-12 Predicting protein function from sequence and structure in NATURE REVIEWS MOLECULAR CELL BIOLOGY
  • 2007-12 Towards a comprehensive structural coverage of completed genomes: a structural genomics viewpoint in BMC BIOINFORMATICS
  • 2007 Gene3D and Understanding Proteome Evolution in STRUCTURAL APPROACHES TO SEQUENCE EVOLUTION
  • 2006-12 Microarray analysis after RNA amplification can detect pronounced differences in gene expression using limma in BMC GENOMICS
  • 2006-10 Protein Superfamily Evolution and the Last Universal Common Ancestor (LUCA) in JOURNAL OF MOLECULAR EVOLUTION
  • 2006 Improved Robustness in Time Series Analysis of Gene Expression Data by Polynomial Model Based Clustering in COMPUTATIONAL LIFE SCIENCES II
  • 2005 Cluster Based Integration of Heterogeneous Biological Databases Using the AutoMed Toolkit in DATA INTEGRATION IN THE LIFE SCIENCES
  • 2004-10 Consensus clustering and functional interpretation of gene-expression data in GENOME BIOLOGY
  • 2004-05 Progress towards mapping the universe of protein folds in GENOME BIOLOGY
  • 2001 A framework for Modelling Short, High-Dimensional Multivariate Time Series: Preliminary Results in Virus Gene Expression Data Analysis in ADVANCES IN INTELLIGENT DATA ANALYSIS
  • 2000-11-01 From structure to function: Approaches and limitations in NATURE STRUCTURAL & MOLECULAR BIOLOGY
  • 1994-12 Protein superfamilles and domain superfolds in NATURE
  • 1994 Protein Fold Families and Structural Motifs in STATISTICAL MECHANICS, PROTEIN STRUCTURE, AND PROTEIN SUBSTRATE INTERACTIONS
  • 1993-09 Shared structural motif in proteins in NATURE
  • 1993-03 Recurrence of a binding motif? in NATURE
  • 1992 A Review of Methods for Protein Structure Comparison in PATTERNS IN PROTEIN SEQUENCE AND STRUCTURE
  • JSON-LD is the canonical representation for SciGraph data.

    TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

    [
      {
        "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
        "affiliation": [
          {
            "affiliation": {
              "id": "https://www.grid.ac/institutes/grid.83440.3b", 
              "type": "Organization"
            }, 
            "isCurrent": true, 
            "type": "OrganizationRole"
          }, 
          {
            "id": "https://www.grid.ac/institutes/grid.225360.0", 
            "type": "Organization"
          }, 
          {
            "id": "https://www.grid.ac/institutes/grid.7445.2", 
            "type": "Organization"
          }, 
          {
            "id": "https://www.grid.ac/institutes/grid.16813.3d", 
            "type": "Organization"
          }, 
          {
            "id": "https://www.grid.ac/institutes/grid.420343.2", 
            "type": "Organization"
          }, 
          {
            "id": "https://www.grid.ac/institutes/grid.13097.3c", 
            "type": "Organization"
          }, 
          {
            "id": "https://www.grid.ac/institutes/grid.5335.0", 
            "type": "Organization"
          }, 
          {
            "id": "https://www.grid.ac/institutes/grid.88379.3d", 
            "type": "Organization"
          }
        ], 
        "familyName": "Orengo", 
        "givenName": "Christine A", 
        "id": "sg:person.01136244107.52", 
        "identifier": {
          "name": "orcid_id", 
          "type": "PropertyValue", 
          "value": [
            "0000-0002-7141-8936"
          ]
        }, 
        "sameAs": [
          "https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01136244107.52", 
          "https://orcid.org/0000-0002-7141-8936"
        ], 
        "sdDataset": "persons", 
        "sdDatePublished": "2019-03-07T14:45", 
        "sdLicense": "https://scigraph.springernature.com/explorer/license/", 
        "sdPublisher": {
          "name": "Springer Nature - SN SciGraph project", 
          "type": "Organization"
        }, 
        "sdSource": "s3://com-uberresearch-data-dimensions-researchers-20181010/20181011/dim_researchers/base/researchers_492.json", 
        "type": "Person"
      }
    ]
     

    Download the RDF metadata as:  json-ld nt turtle xml License info

    HOW TO GET THIS DATA PROGRAMMATICALLY:

    JSON-LD is a popular format for linked data which is fully compatible with JSON.

    curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/person.01136244107.52'

    N-Triples is a line-based linked data format ideal for batch operations.

    curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/person.01136244107.52'

    Turtle is a human-readable linked data format.

    curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/person.01136244107.52'

    RDF/XML is a standard XML format for linked data.

    curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/person.01136244107.52'


     

    This table displays all metadata directly associated to this object as RDF triples.

    35 TRIPLES      11 PREDICATES      20 URIs      8 LITERALS      3 BLANK NODES

    Subject Predicate Object
    1 sg:person.01136244107.52 schema:affiliation Ne40e8d8b0bf444a0a9570ac0ebd74a3e
    2 https://www.grid.ac/institutes/grid.13097.3c
    3 https://www.grid.ac/institutes/grid.16813.3d
    4 https://www.grid.ac/institutes/grid.225360.0
    5 https://www.grid.ac/institutes/grid.420343.2
    6 https://www.grid.ac/institutes/grid.5335.0
    7 https://www.grid.ac/institutes/grid.7445.2
    8 https://www.grid.ac/institutes/grid.88379.3d
    9 schema:familyName Orengo
    10 schema:givenName Christine A
    11 schema:identifier N8cb10424430b46cb80a8d72b0894f43c
    12 schema:sameAs https://app.dimensions.ai/discover/publication?and_facet_researcher=ur.01136244107.52
    13 https://orcid.org/0000-0002-7141-8936
    14 schema:sdDatePublished 2019-03-07T14:45
    15 schema:sdLicense https://scigraph.springernature.com/explorer/license/
    16 schema:sdPublisher Ne00d72a976044d0e9f77d2834a6343bf
    17 sgo:license sg:explorer/license/
    18 sgo:sdDataset persons
    19 rdf:type schema:Person
    20 N8cb10424430b46cb80a8d72b0894f43c schema:name orcid_id
    21 schema:value 0000-0002-7141-8936
    22 rdf:type schema:PropertyValue
    23 Ne00d72a976044d0e9f77d2834a6343bf schema:name Springer Nature - SN SciGraph project
    24 rdf:type schema:Organization
    25 Ne40e8d8b0bf444a0a9570ac0ebd74a3e schema:affiliation https://www.grid.ac/institutes/grid.83440.3b
    26 sgo:isCurrent true
    27 rdf:type schema:OrganizationRole
    28 https://www.grid.ac/institutes/grid.13097.3c schema:Organization
    29 https://www.grid.ac/institutes/grid.16813.3d schema:Organization
    30 https://www.grid.ac/institutes/grid.225360.0 schema:Organization
    31 https://www.grid.ac/institutes/grid.420343.2 schema:Organization
    32 https://www.grid.ac/institutes/grid.5335.0 schema:Organization
    33 https://www.grid.ac/institutes/grid.7445.2 schema:Organization
    34 https://www.grid.ac/institutes/grid.83440.3b schema:Organization
    35 https://www.grid.ac/institutes/grid.88379.3d schema:Organization
     




    Preview window. Press ESC to close (or click here)


    ...