Joseph R Ecker

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Joseph R



Publications in SciGraph latest 50 shown

  • 2018-12 Robust single-cell DNA methylome profiling with snmC-seq2 in NATURE COMMUNICATIONS
  • 2018-12 Author Correction: A B-ARR-mediated cytokinin transcriptional network directs hormone cross-regulation and shoot development in NATURE COMMUNICATIONS
  • 2018-12 High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell in NATURE COMMUNICATIONS
  • 2018-12 A B-ARR-mediated cytokinin transcriptional network directs hormone cross-regulation and shoot development in NATURE COMMUNICATIONS
  • 2017-12-08 Challenges and recommendations for epigenomics in precision health in NATURE BIOTECHNOLOGY
  • 2017-12 Dynamic DNA methylation reconfiguration during seed development and germination in GENOME BIOLOGY
  • 2017-08 CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping in NATURE METHODS
  • 2017-07-20 Mapping genome-wide transcription-factor binding sites using DAP-seq in NATURE PROTOCOLS
  • 2017-06-28 CrY2H-seq interactome screening in PROTOCOL EXCHANGE
  • 2016-12 EIN2-dependent regulation of acetylation of histone H3K14 and non-canonical histone H3K23 in ethylene signalling in NATURE COMMUNICATIONS
  • 2016-12 Phased diploid genome assembly with single-molecule real-time sequencing in NATURE METHODS
  • 2016-09 An ABA-increased interaction of the PYL6 ABA receptor with MYC2 Transcription Factor: A putative link of ABA and JA signaling in SCIENTIFIC REPORTS
  • 2016-04-29 Unique cell-type-specific patterns of DNA methylation in the root meristem in NATURE PLANTS
  • 2016-04 Active DNA demethylation at enhancers during the vertebrate phylotypic period in NATURE GENETICS
  • 2016-02 Corrigendum: Human body epigenome maps reveal noncanonical DNA methylation variation in NATURE
  • 2016-01 Human DNA methylomes of neurodegenerative diseases show common epigenomic patterns in TRANSLATIONAL PSYCHIATRY
  • 2015-12 methylPipe and compEpiTools: a suite of R packages for the integrative analysis of epigenomics data in BMC BIOINFORMATICS
  • 2015-07 Human body epigenome maps reveal noncanonical DNA methylation variation in NATURE
  • 2015-05-06 An alternative pluripotent state confers interspecies chimaeric competency in NATURE
  • 2015-03 MethylC-seq library preparation for base-resolution whole-genome bisulfite sequencing in NATURE PROTOCOLS
  • 2015-02 Chromatin architecture reorganization during stem cell differentiation in NATURE
  • 2015-02 Integrative analysis of haplotype-resolved epigenomes across human tissues in NATURE
  • 2015 A User’s Guide to the Arabidopsis T-DNA Insertion Mutant Collections in PLANT FUNCTIONAL GENOMICS
  • 2014-10 Corrigendum: Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells in NATURE
  • 2013-03 Patterns of population epigenomic diversity in NATURE
  • 2011-11 RF1 knockout allows ribosomal incorporation of unnatural amino acids at multiple sites in NATURE CHEMICAL BIOLOGY
  • 2011-05 Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells in NATURE
  • 2011-03 Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells in NATURE
  • 2010-10 The NIH Roadmap Epigenomics Mapping Consortium in NATURE BIOTECHNOLOGY
  • 2010-10 Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications in NATURE BIOTECHNOLOGY
  • 2010-06 Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines in NATURE
  • 2009-12 Addendum: Literature-curated protein interaction datasets in NATURE METHODS
  • 2009-11 Human DNA methylomes at base resolution show widespread epigenomic differences in NATURE
  • 2009-02 Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays in GENOME BIOLOGY
  • 2009-01 Literature-curated protein interaction datasets in NATURE METHODS
  • 2007-11 An adapter ligation-mediated PCR method for high-throughput mapping of T-DNA inserts in the Arabidopsis genome in NATURE PROTOCOLS
  • 2007-09 Recombination and linkage disequilibrium in Arabidopsis thaliana in NATURE GENETICS
  • 2006-10 The ACC synthase TOE sequence is required for interaction with ETO1 family proteins and destabilization of target proteins in PLANT MOLECULAR BIOLOGY
  • 2006-07 Moving forward in reverse: genetic technologies to enable genome-wide phenomic screens in Arabidopsis in NATURE REVIEWS GENETICS
  • 2005-12 Arabidopsis ETO1 specifically interacts with and negatively regulates type 2 1-aminocyclopropane-1-carboxylate synthases in BMC PLANT BIOLOGY
  • 2005-12 A role for LEDGF/p75 in targeting HIV DNA integration in NATURE MEDICINE
  • 2004-04 Regulation of ethylene gas biosynthesis by the Arabidopsis ETO1 protein in NATURE
  • 2003-01 Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrinIX in NATURE
  • 2002-12 Divergent perspectives on GM food in NATURE BIOTECHNOLOGY
  • 2001-04 Phototropin-related NPL1 controls chloroplast relocation induced by blue light in NATURE
  • 2001-03 An Arabidopsis circadian clock component interacts with both CRY1 and phyB in NATURE
  • 1999-07 A complete BAC-based physical map of the Arabidopsis thaliana genome in NATURE GENETICS
  • 1994 Molecular and Genetic Analysis of the Constitutive Ethylene Response Mutation Ctr1 in PLANT MOLECULAR BIOLOGY
  • 1991 An Arabidopsis Thaliana Leucine Zipper Protein that Binds to G-Box Promoter Sequences in PHYTOCHROME PROPERTIES AND BIOLOGICAL ACTION
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