Henning Hermjakob

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Publications in SciGraph latest 50 shown

  • 2019-12 Capturing variation impact on molecular interactions in the IMEx Consortium mutations data set in NATURE COMMUNICATIONS
  • 2018-12 Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions in BMC BIOINFORMATICS
  • 2018-12 Integrated omics dissection of proteome dynamics during cardiac remodeling in NATURE COMMUNICATIONS
  • 2018-11-20 A reference set of curated biomedical data and metadata from clinical case reports in SCIENTIFIC DATA
  • 2018-05-08 Uniform resolution of compact identifiers for biomedical data in SCIENTIFIC DATA
  • 2017-12 Reactome pathway analysis: a high-performance in-memory approach in BMC BIOINFORMATICS
  • 2017-05-09 Discovering and linking public omics data sets using the Omics Discovery Index in NATURE BIOTECHNOLOGY
  • 2016-08 Recognizing millions of consistently unidentified spectra across hundreds of shotgun proteomics datasets in NATURE METHODS
  • 2016 Equipping Physiologists with an Informatics Tool Chest: Toward an Integerated Mitochondrial Phenome in PHARMACOLOGY OF MITOCHONDRIA
  • 2015-03 A public repository for mass spectrometry imaging data in ANALYTICAL AND BIOANALYTICAL CHEMISTRY
  • 2015 BioModels Database: a Public Repository for Sharing Models of Biological Processes in ENCYCLOPEDIA OF COMPUTATIONAL NEUROSCIENCE
  • 2014-12 BioModels linked dataset in BMC SYSTEMS BIOLOGY
  • 2014-03 ProteomeXchange provides globally coordinated proteomics data submission and dissemination in NATURE BIOTECHNOLOGY
  • 2013-12 Path2Models: large-scale generation of computational models from biochemical pathway maps in BMC SYSTEMS BIOLOGY
  • 2013-02 PRIDE Cluster: building a consensus of proteomics data in NATURE METHODS
  • 2013 BioModels Database: a public repository for sharing models of biological processes in ENCYCLOPEDIA OF COMPUTATIONAL NEUROSCIENCE
  • 2012-12 Hydra: a scalable proteomic search engine which utilizes the Hadoop distributed computing framework in BMC BIOINFORMATICS
  • 2012-09 Shouldn't enantiomeric purity be included in the 'minimum information about a bioactive entity? Response from the MIABE group in NATURE REVIEWS DRUG DISCOVERY
  • 2012-06 Corrigendum: Protein interaction data curation: the International Molecular Exchange (IMEx) consortium in NATURE METHODS
  • 2012-04 Protein interaction data curation: the International Molecular Exchange (IMEx) consortium in NATURE METHODS
  • 2012-02 Toward interoperable bioscience data in NATURE GENETICS
  • 2012-02 PRIDE Inspector: a tool to visualize and validate MS proteomics data in NATURE BIOTECHNOLOGY
  • 2011-12 DAS Writeback: A Collaborative Annotation System in BMC BIOINFORMATICS
  • 2011-12 easyDAS: Automatic creation of DAS servers in BMC BIOINFORMATICS
  • 2011-09 Minimum information about a bioactive entity (MIABE) in NATURE REVIEWS DRUG DISCOVERY
  • 2011-06-29 PSICQUIC and PSISCORE: accessing and scoring molecular interactions in NATURE METHODS
  • 2011 Preparing Molecular Interaction Data for Publication in BIOINFORMATICS FOR COMPARATIVE PROTEOMICS
  • 2010-10-13 Data Standardization by the HUPO-PSI: How has the Community Benefitted? in DATA MINING IN PROTEOMICS
  • 2010-07 Minimum information about a protein affinity reagent (MIAPAR) in NATURE BIOTECHNOLOGY
  • 2010 Meeting Report from the Second “Minimum Information for Biological and Biomedical Investigations” (MIBBI) workshop in STANDARDS IN GENOMIC SCIENCES
  • 2009-12 Recurated protein interaction datasets in NATURE METHODS
  • 2009-06 New open drug activity data at EBI in CHEMISTRY CENTRAL JOURNAL
  • 2009-05-06 Present and future of proteomics data curation at the PRIDE database in NATURE PRECEDINGS
  • 2008-12 Integrating biological data – the Distributed Annotation System in BMC BIOINFORMATICS
  • 2008-12 OntoDas – a tool for facilitating the construction of complex queries to the Gene Ontology in BMC BIOINFORMATICS
  • 2008-10 InteroPORC: an automated tool to predict highly conserved protein interaction networks in BMC BIOINFORMATICS
  • 2008-09 MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data in GENOME BIOLOGY
  • 2008-08 Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project in NATURE BIOTECHNOLOGY
  • 2008-05 Calling on a million minds for community annotation in WikiProteins in GENOME BIOLOGY
  • 2008-05 The minimum information about a genome sequence (MIGS) specification in NATURE BIOTECHNOLOGY
  • 2008 Protein-protein interactions: analysis and prediction in MODERN GENOME ANNOTATION
  • 2008 Infrastructure for distributed protein annotation in MODERN GENOME ANNOTATION
  • 2008 Data Standards and Controlled Vocabularies for Proteomics in FUNCTIONAL PROTEOMICS
  • 2008 ENFIN - An Integrative Structure for Systems Biology in DATA INTEGRATION IN THE LIFE SCIENCES
  • 2007-12 The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases in BMC BIOINFORMATICS
  • 2007-12 Broadening the horizon – level 2.5 of the HUPO-PSI format for molecular interactions in BMC BIOLOGY
  • 2007-12 An informatic pipeline for the data capture and submission of quantitative proteomic data using iTRAQTM in PROTEOME SCIENCE
  • 2007-10 The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics in NATURE BIOTECHNOLOGY
  • 2007-08 The minimum information about a proteomics experiment (MIAPE) in NATURE BIOTECHNOLOGY
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