Eric W Deutsch

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Eric W



Publications in SciGraph latest 50 shown

  • 2022-09-29 RTX-KG2: a system for building a semantically standardized knowledge graph for translational biomedicine in BMC BIOINFORMATICS
  • 2022-07-13 Standardized annotation of translated open reading frames in NATURE BIOTECHNOLOGY
  • 2021-10-06 A proteomics sample metadata representation for multiomics integration and big data analysis in NATURE COMMUNICATIONS
  • 2021-06-28 Universal Spectrum Identifier for mass spectra in NATURE METHODS
  • 2020-10-16 A high-stringency blueprint of the human proteome in NATURE COMMUNICATIONS
  • 2018-08-07 A tissue-based draft map of the murine MHC class I immunopeptidome in SCIENTIFIC DATA
  • 2018-01-31 The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data in GENOME BIOLOGY
  • 2017-12-18 Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework in GENOME MEDICINE
  • 2017-09-08 A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactions in SCIENTIFIC REPORTS
  • 2017-05-09 Discovering and linking public omics data sets using the Omics Discovery Index in NATURE BIOTECHNOLOGY
  • 2017-01-30 Building ProteomeTools based on a complete synthetic human proteome in NATURE METHODS
  • 2016-07-28 An Open Data Format for Visualization and Analysis of Cross-Linked Mass Spectrometry Results in JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
  • 2015-09-29 reSpect: Software for Identification of High and Low Abundance Ion Species in Chimeric Tandem Mass Spectra in JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
  • 2014-09-16 A repository of assays to quantify 10,000 human proteins by SWATH-MS in SCIENTIFIC DATA
  • 2014-03-10 ProteomeXchange provides globally coordinated proteomics data submission and dissemination in NATURE BIOTECHNOLOGY
  • 2013-01-20 A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis in NATURE
  • 2012-12-05 Hydra: a scalable proteomic search engine which utilizes the Hadoop distributed computing framework in BMC BIOINFORMATICS
  • 2012-10-10 A cross-platform toolkit for mass spectrometry and proteomics in NATURE BIOTECHNOLOGY
  • 2012-03-07 The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome in NATURE BIOTECHNOLOGY
  • 2011-06-03 A honey bee (Apis mellifera L.) PeptideAtlas crossing castes and tissues in BMC GENOMICS
  • 2011-03-18 ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry in BMC BIOINFORMATICS
  • 2011-02-23 Using the Human Plasma PeptideAtlas to Study Human Plasma Proteins in SERUM/PLASMA PROTEOMICS
  • 2011-01-29 Data Standards for Omics Data: The Basis of Data Sharing and Reuse in BIOINFORMATICS FOR OMICS DATA
  • 2010-10-13 Tandem Mass Spectrometry Spectral Libraries and Library Searching in DATA MINING IN PROTEOMICS
  • 2010-10-13 Spectra, Chromatograms, Metadata: mzML-The Standard Data Format for Mass Spectrometer Output in DATA MINING IN PROTEOMICS
  • 2010-03-10 mspecLINE: bridging knowledge of human disease with the proteome in BMC MEDICAL GENOMICS
  • 2009-12-05 The PeptideAtlas Project in PROTEOME BIOINFORMATICS
  • 2009-12-05 Mass Spectrometer Output File Format mzML in PROTEOME BIOINFORMATICS
  • 2009-10-18 Visual proteomics of the human pathogen Leptospira interrogans in NATURE METHODS
  • 2009-08-05 Standards for Functional Genomics in BIOINFORMATICS
  • 2009-07-15 Proteome-wide cellular protein concentrations of the human pathogen Leptospira interrogans in NATURE
  • 2009-05-17 A HUPO test sample study reveals common problems in mass spectrometry–based proteomics in NATURE METHODS
  • 2009-02-11 The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation in BMC BIOINFORMATICS
  • 2008-11 A database of mass spectrometric assays for the yeast proteome in NATURE METHODS
  • 2008-09-21 Building consensus spectral libraries for peptide identification in proteomics in NATURE METHODS
  • 2008-08 Guidelines for reporting the use of mass spectrometry in proteomics in NATURE BIOTECHNOLOGY
  • 2008-08 Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project in NATURE BIOTECHNOLOGY
  • 2008-06-03 A mouse plasma peptide atlas as a resource for disease proteomics in GENOME BIOLOGY
  • 2008-05-23 Correlation of mRNA and protein levels: Cell type-specific gene expression of cluster designation antigens in the prostate in BMC GENOMICS
  • 2008-03-07 Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE) in NATURE BIOTECHNOLOGY
  • 2008-02 Human Proteinpedia enables sharing of human protein data in NATURE BIOTECHNOLOGY
  • 2007-12-11 The urologic epithelial stem cell database (UESC) – a web tool for cell type-specific gene expression and immunohistochemistry images of the prostate and bladder in BMC UROLOGY
  • 2007-08-08 The minimum information about a proteomics experiment (MIAPE) in NATURE BIOTECHNOLOGY
  • 2007-05-01 A high-quality catalog of the Drosophila melanogaster proteome in NATURE BIOTECHNOLOGY
  • 2006-11-13 Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas in GENOME BIOLOGY
  • 2006-06-06 SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology in BMC BIOINFORMATICS
  • 2004-12-10 Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry in GENOME BIOLOGY
  • 2004-11-01 A common open representation of mass spectrometry data and its application to proteomics research in NATURE BIOTECHNOLOGY
  • 2004-07-12 Comprehensive de novo structure prediction in a systems-biology context for the archaea Halobacterium sp. NRC-1 in GENOME BIOLOGY
  • 2003-03 A systematic approach to modeling, capturing, and disseminating proteomics experimental data in NATURE BIOTECHNOLOGY
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