Josh D Neufeld

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Josh D



Publications in SciGraph latest 50 shown

  • 2017-12 Anaerobic oxidation of methane coupled with extracellular electron transfer to electrodes in SCIENTIFIC REPORTS
  • 2017-12 Inter-personal diversity and temporal dynamics of dental, tongue, and salivary microbiota in the healthy oral cavity in NPJ BIOFILMS AND MICROBIOMES
  • 2017-12 Millions of Boreal Shield Lakes can be used to Probe Archaean Ocean Biogeochemistry in SCIENTIFIC REPORTS
  • 2017-11 Temporal Variations of Microbiota Associated with the Immature Stages of Two Florida Culex Mosquito Vectors in MICROBIAL ECOLOGY
  • 2017-11 A communal catalogue reveals Earth’s multiscale microbial diversity in NATURE
  • 2017-07-14 Enhancing Functional Metagenomics of Complex Microbial Communities Using Stable Isotopes in FUNCTIONAL METAGENOMICS: TOOLS AND APPLICATIONS
  • 2017-07-14 Metagenomic Cosmid Libraries Suitable for Functional Screening in Proteobacteria in FUNCTIONAL METAGENOMICS: TOOLS AND APPLICATIONS
  • 2017-05 Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system in THE ISME JOURNAL
  • 2017 DNA-, RNA-, and Protein-Based Stable-Isotope Probing for High-Throughput Biomarker Analysis of Active Microorganisms in METAGENOMICS
  • 2016-01 Microbial dynamics and properties of aerobic granules developed in a laboratory-scale sequencing batch reactor with an intermediate filamentous bulking stage in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
  • 2016 Introduction to Microbial Quantitation, Community Profiling, and Array Approaches in HYDROCARBON AND LIPID MICROBIOLOGY PROTOCOLS
  • 2016 Analysis of Active Methylotrophic Communities: When DNA-SIP Meets High-Throughput Technologies in MICROBIAL ENVIRONMENTAL GENOMICS (MEG)
  • 2015-12 MetAnnotate: function-specific taxonomic profiling and comparison of metagenomes in BMC BIOLOGY
  • 2015-12 Microbial biogeography of a university campus in MICROBIOME
  • 2015-12 Developmental succession of the microbiome of Culex mosquitoes in BMC MICROBIOLOGY
  • 2015-04 Ecology and exploration of the rare biosphere in NATURE REVIEWS MICROBIOLOGY
  • 2015-02 Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production in THE ISME JOURNAL
  • 2015 Open Resource Metagenomics in ENCYCLOPEDIA OF METAGENOMICS
  • 2015 Denaturing Gradient Gel Electrophoresis (DGGE) for Microbial Community Analysis in HYDROCARBON AND LIPID MICROBIOLOGY PROTOCOLS
  • 2015 Clone Libraries of Ribosomal RNA Gene Sequences for Characterization of Microbial Communities in HYDROCARBON AND LIPID MICROBIOLOGY PROTOCOLS
  • 2015 Generating Enriched Metagenomes from Active Microorganisms with DNA Stable Isotope Probing in HYDROCARBON AND LIPID MICROBIOLOGY PROTOCOLS
  • 2014-12 Bacterial community composition of chronic periodontitis and novel oral sampling sites for detecting disease indicators in MICROBIOME
  • 2013-12 AXIOME: automated exploration of microbial diversity in GIGASCIENCE
  • 2013-04-15 Meeting Report: 1st International Functional Metagenomics Workshop May 7–8, 2012, St. Jacobs, Ontario, Canada. in STANDARDS IN GENOMIC SCIENCES
  • 2013 Open Resource Metagenomics in ENCYCLOPEDIA OF METAGENOMICS
  • 2012-12 PANDAseq: paired-end assembler for illumina sequences in BMC BIOINFORMATICS
  • 2012-11 Targeted recovery of novel phylogenetic diversity from next-generation sequence data in THE ISME JOURNAL
  • 2011-12 Bacterial biogeography of the human digestive tract in SCIENTIFIC REPORTS
  • 2011-11-23 Open resource metagenomics: a model for sharing metagenomic libraries in STANDARDS IN GENOMIC SCIENCES
  • 2011-05 Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications in NATURE BIOTECHNOLOGY
  • 2010-08-13 Metagenomic Analysis of Isotopically Enriched DNA in METAGENOMICS
  • 2010 Denaturing Gradient Gel Electrophoresis (DGGE) for Microbial Community Analysis in HANDBOOK OF HYDROCARBON AND LIPID MICROBIOLOGY
  • 2010 Multiple Displacement Amplification in HANDBOOK OF HYDROCARBON AND LIPID MICROBIOLOGY
  • 2010 Clone Libraries of Ribosomal RNA Gene Sequences for Characterization of Bacterial and Fungal Communities in HANDBOOK OF HYDROCARBON AND LIPID MICROBIOLOGY
  • 2008-03 Something from (almost) nothing: the impact of multiple displacement amplification on microbial ecology in THE ISME JOURNAL
  • 2008 Section 3 update - Identification and classification of microbes using DNA and RNA sequences in MOLECULAR MICROBIAL ECOLOGY MANUAL
  • 2008 Section 3 update: SARST, Serial Analysis of Ribosomal Sequence Tags in MOLECULAR MICROBIAL ECOLOGY MANUAL
  • 2007-10 Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism in THE ISME JOURNAL
  • 2007-08 Witnessing the last supper of uncultivated microbial cells with Raman-FISH in THE ISME JOURNAL
  • 2007-06 Who eats what, where and when? Isotope-labelling experiments are coming of age in THE ISME JOURNAL
  • 2007-04 DNA stable-isotope probing in NATURE PROTOCOLS
  • 2007-04 Methodological Considerations for the Use of Stable Isotope Probing in Microbial Ecology in MICROBIAL ECOLOGY
  • 2006 Assessment of Microbial Phylogenetic Diversity Based on Environmental Nucleic Acids in MOLECULAR IDENTIFICATION, SYSTEMATICS, AND POPULATION STRUCTURE OF PROKARYOTES
  • 2004-09 Characterization of Humus Microbial Communities in Adjacent Forest Types That Differ in Nitrogen Availability in MICROBIAL ECOLOGY
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