Paul Stothard

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Publications in SciGraph latest 50 shown

  • 2019-12 Accuracy of imputation to whole-genome sequence in sheep in GENETICS SELECTION EVOLUTION
  • 2018-12 Variance explained by whole genome sequence variants in coding and regulatory genome annotations for six dairy traits in BMC GENOMICS
  • 2018-12 Transcriptome analyses reveal reduced hepatic lipid synthesis and accumulation in more feed efficient beef cattle in SCIENTIFIC REPORTS
  • 2018-12 Sequencing the mosaic genome of Brahman cattle identifies historic and recent introgression including polled in SCIENTIFIC REPORTS
  • 2018-12 Genomic evaluation of feed efficiency component traits in Duroc pigs using 80K, 650K and whole-genome sequence variants in GENETICS SELECTION EVOLUTION
  • 2018-11 The evolution of ecological facilitation within mixed-species biofilms in the mouse gastrointestinal tract in THE ISME JOURNAL
  • 2018-03 Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals in NATURE GENETICS
  • 2017-12 Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection in SCIENTIFIC REPORTS
  • 2017-12 Genome-wide association studies and genomic prediction of breeding values for calving performance and body conformation traits in Holstein cattle in GENETICS SELECTION EVOLUTION
  • 2016-12 Bioinformatic analyses in early host response to Porcine Reproductive and Respiratory Syndrome virus (PRRSV) reveals pathway differences between pigs with alternate genotypes for a major host response QTL in BMC GENOMICS
  • 2016-12 Transcriptome profiling of the rumen epithelium of beef cattle differing in residual feed intake in BMC GENOMICS
  • 2016-12 Genotype Imputation Methods and Their Effects on Genomic Predictions in Cattle in SPRINGER SCIENCE REVIEWS
  • 2016-12 Genome-wide association for milk production and female fertility traits in Canadian dairy Holstein cattle in BMC GENETICS
  • 2016-12 Genome-wide analysis of the transcriptional response to porcine reproductive and respiratory syndrome virus infection at the maternal/fetal interface and in the fetus in BMC GENOMICS
  • 2016-12 Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves in BMC GENOMICS
  • 2016-12 Tissues, Metabolic Pathways and Genes of Key Importance in Lactating Dairy Cattle in SPRINGER SCIENCE REVIEWS
  • 2015-12 Whole genome SNP genotype piecemeal imputation in BMC BIOINFORMATICS
  • 2015-12 Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection in BMC GENOMICS
  • 2015-12 Genome-wide association and genomic prediction of breeding values for fatty acid composition in subcutaneous adipose and longissimus lumborum muscle of beef cattle in BMC GENETICS
  • 2015-12 The isolation and characterization of two Stenotrophomonas maltophilia bacteriophages capable of cross-taxonomic order infectivity in BMC GENOMICS
  • 2015-12 A large and diverse collection of bovine genome sequences from the Canadian Cattle Genome Project in GIGASCIENCE
  • 2015-12 Harnessing cross-species alignment to discover SNPs and generate a draft genome sequence of a bighorn sheep (Ovis canadensis) in BMC GENOMICS
  • 2015-10 Genome-wide whole blood microRNAome and transcriptome analyses reveal miRNA-mRNA regulated host response to foodborne pathogen Salmonella infection in swine in SCIENTIFIC REPORTS
  • 2014-12 Gene co-expression network analysis identifies porcine genes associated with variation in Salmonella shedding in BMC GENOMICS
  • 2014-12 Increasing gene discovery and coverage using RNA-seq of globin RNA reduced porcine blood samples in BMC GENOMICS
  • 2014-12 Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle in BMC GENETICS
  • 2014-08 Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle in NATURE GENETICS
  • 2013-12 Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars in NATURE GENETICS
  • 2013-12 Whole-genome resequencing of Hanwoo (Korean cattle) and insight into regions of homozygosity in BMC GENOMICS
  • 2013-12 Expansion of ruminant-specific microRNAs shapes target gene expression divergence between ruminant and non-ruminant species in BMC GENOMICS
  • 2013-09 Massively parallel sequencing of Chikso (Korean brindle cattle) to discover genome-wide SNPs and InDels in MOLECULES AND CELLS
  • 2013-04 Genome-wide copy number variation in Hanwoo, Black Angus, and Holstein cattle in MAMMALIAN GENOME
  • 2013 Transcriptome profile comparison between beef and dairy adipose pooled mRNA reveals differences in ENERGY AND PROTEIN METABOLISM AND NUTRITION IN SUSTAINABLE ANIMAL PRODUCTION
  • 2012-12 Fast accurate missing SNP genotype local imputation in BMC RESEARCH NOTES
  • 2012-12 Comparative analysis of two phenotypically-similar but genomically-distinct Burkholderia cenocepacia-specific bacteriophages in BMC GENOMICS
  • 2012-12 Comparing thousands of circular genomes using the CGView Comparison Tool in BMC GENOMICS
  • 2011-12 Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery in BMC GENOMICS
  • 2010-12 Metabolic flexibility revealed in the genome of the cyst-forming α-1 proteobacterium Rhodospirillum centenum in BMC GENOMICS
  • 2010-12 Genomic analysis and relatedness of P2-like phages of the Burkholderia cepacia complex in BMC GENOMICS
  • 2010-12 A 2cM genome-wide scan of European Holstein cattle affected by classical BSE in BMC GENETICS
  • 2009-12 Characterization of bovine miRNAs by sequencing and bioinformatics analysis in BMC MOLECULAR BIOLOGY
  • 2009-12 Most parsimonious haplotype allele sharing determination in BMC BIOINFORMATICS
  • 2009 In Sffamily Identification of Genes in Bacteriophage DNA in BACTERIOPHAGES
  • 2008-12 A first generation whole genome RH map of the river buffalo with comparison to domestic cattle in BMC GENOMICS
  • 2008-12 Genomic sequence and activity of KS10, a transposable phage of the Burkholderia cepacia complex in BMC GENOMICS
  • 2008-12 High density linkage disequilibrium maps of chromosome 14 in Holstein and Angus cattle in BMC GENETICS
  • 2007-12 High resolution radiation hybrid maps of bovine chromosomes 19 and 29: comparison with the bovine genome sequence assembly in BMC GENOMICS
  • 2007-12 Whole genome linkage disequilibrium maps in cattle in BMC GENETICS
  • 2007-12 A high resolution radiation hybrid map of bovine chromosome 14 identifies scaffold rearrangement in the latest bovine assembly in BMC GENOMICS
  • 2006-03 Conspecific and Interspecific Interactions Between the FEM-2 and the FEM-3 Sex-Determining Proteins Despite Rapid Sequence Divergence in JOURNAL OF MOLECULAR EVOLUTION
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