Indexing a reference sequence for oligomer sequence mapping


Ontology type: sgo:Patent     


Patent Info

DATE

2014-05-27T00:00

AUTHORS

Aaron L. Halpern , Igor Nazarenko

ABSTRACT

Generating an index includes receiving a reference sequence and applying one or more key patterns to the reference sequence to obtain a plurality of keys in the index. Each of the one or more key patterns is derived based on a corresponding set of oligomer sequence relationships of a plurality of oligomer sequences that are expected to be generated from the reference, and the keys correspond to a plurality of candidate and/or validated locations in the reference sequence. More... »

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