Method for pairwise sequencing of target polynucleotides


Ontology type: sgo:Patent     


Patent Info

DATE

2012-01-31T00:00

AUTHORS

Roberto Rigatti , Tobias William Barr Ost

ABSTRACT

The invention relates to methods for pairwise sequencing of a double-stranded polynucleotide template, which methods result in the sequential determination of nucleotide sequences in two distinct and separate regions of the polynucleotide template. Using the methods of the invention it is possible to obtain two linked or paired reads of sequence information from each double-stranded template on a clustered array, rather than just a single sequencing read from one strand of the template. More... »

Related SciGraph Publications

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "about": [
      {
        "id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/2620", 
        "inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/", 
        "type": "DefinedTerm"
      }
    ], 
    "author": [
      {
        "name": "Roberto Rigatti", 
        "type": "Person"
      }, 
      {
        "name": "Tobias William Barr Ost", 
        "type": "Person"
      }
    ], 
    "citation": [
      {
        "id": "https://doi.org/10.1016/0022-2836(80)90196-5", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1000526178"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/24.2.380", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1006466238"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1073/pnas.89.5.1827", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1007596846"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/bioinformatics/btl629", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1017299791"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature03959", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021574562", 
          "https://doi.org/10.1038/nature03959"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "sg:pub.10.1038/nature03959", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1021574562", 
          "https://doi.org/10.1038/nature03959"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1093/nar/25.3.677", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1039638324"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1006/abio.1996.0068", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1043308714"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1101/gr.2.4.318", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1049824033"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1126/science.2448875", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1062538000"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1517/14622416.6.4.373", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1067587881"
        ], 
        "type": "CreativeWork"
      }, 
      {
        "id": "https://doi.org/10.1517/14622416.6.4.373", 
        "sameAs": [
          "https://app.dimensions.ai/details/publication/pub.1067587881"
        ], 
        "type": "CreativeWork"
      }
    ], 
    "datePublished": "2012-01-31T00:00", 
    "description": "

The invention relates to methods for pairwise sequencing of a double-stranded polynucleotide template, which methods result in the sequential determination of nucleotide sequences in two distinct and separate regions of the polynucleotide template. Using the methods of the invention it is possible to obtain two linked or paired reads of sequence information from each double-stranded template on a clustered array, rather than just a single sequencing read from one strand of the template.

", "id": "sg:patent.US-8105784-B2", "keywords": [ "method", "sequencing", "polynucleotides", "invention", "method result", "determination", "Base Sequence", "separate region", "sequence information", "template", "array", "strand" ], "name": "Method for pairwise sequencing of target polynucleotides", "recipient": [ { "id": "https://www.grid.ac/institutes/grid.434747.7", "type": "Organization" } ], "sameAs": [ "https://app.dimensions.ai/details/patent/US-8105784-B2" ], "sdDataset": "patents", "sdDatePublished": "2019-04-18T10:08", "sdLicense": "https://scigraph.springernature.com/explorer/license/", "sdPublisher": { "name": "Springer Nature - SN SciGraph project", "type": "Organization" }, "sdSource": "s3://com-uberresearch-data-patents-target-20190320-rc/data/sn-export/402f166718b70575fb5d4ffe01f064d1/0000100128-0000352499/json_export_00290.jsonl", "type": "Patent" } ]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/patent.US-8105784-B2'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/patent.US-8105784-B2'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/patent.US-8105784-B2'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/patent.US-8105784-B2'


 

This table displays all metadata directly associated to this object as RDF triples.

69 TRIPLES      15 PREDICATES      36 URIs      20 LITERALS      2 BLANK NODES

Subject Predicate Object
1 sg:patent.US-8105784-B2 schema:about anzsrc-for:2620
2 schema:author N2dad2191bebf4347af31440a2ea1fb7b
3 schema:citation sg:pub.10.1038/nature03959
4 https://doi.org/10.1006/abio.1996.0068
5 https://doi.org/10.1016/0022-2836(80)90196-5
6 https://doi.org/10.1073/pnas.89.5.1827
7 https://doi.org/10.1093/bioinformatics/btl629
8 https://doi.org/10.1093/nar/24.2.380
9 https://doi.org/10.1093/nar/25.3.677
10 https://doi.org/10.1101/gr.2.4.318
11 https://doi.org/10.1126/science.2448875
12 https://doi.org/10.1517/14622416.6.4.373
13 schema:datePublished 2012-01-31T00:00
14 schema:description <p num="p-0001">The invention relates to methods for pairwise sequencing of a double-stranded polynucleotide template, which methods result in the sequential determination of nucleotide sequences in two distinct and separate regions of the polynucleotide template. Using the methods of the invention it is possible to obtain two linked or paired reads of sequence information from each double-stranded template on a clustered array, rather than just a single sequencing read from one strand of the template.</p>
15 schema:keywords Base Sequence
16 array
17 determination
18 invention
19 method
20 method result
21 polynucleotides
22 separate region
23 sequence information
24 sequencing
25 strand
26 template
27 schema:name Method for pairwise sequencing of target polynucleotides
28 schema:recipient https://www.grid.ac/institutes/grid.434747.7
29 schema:sameAs https://app.dimensions.ai/details/patent/US-8105784-B2
30 schema:sdDatePublished 2019-04-18T10:08
31 schema:sdLicense https://scigraph.springernature.com/explorer/license/
32 schema:sdPublisher N508a2acc25d84c548b6015945f228b16
33 sgo:license sg:explorer/license/
34 sgo:sdDataset patents
35 rdf:type sgo:Patent
36 N2dad2191bebf4347af31440a2ea1fb7b rdf:first N74b9cfd1b52a4dad85b378d0f491c2c8
37 rdf:rest Nf9e348529a6c401f9c3256a33178391c
38 N508a2acc25d84c548b6015945f228b16 schema:name Springer Nature - SN SciGraph project
39 rdf:type schema:Organization
40 N74b9cfd1b52a4dad85b378d0f491c2c8 schema:name Roberto Rigatti
41 rdf:type schema:Person
42 Nbd2cbb71c6e249a38c2bfdcce39e2a50 schema:name Tobias William Barr Ost
43 rdf:type schema:Person
44 Nf9e348529a6c401f9c3256a33178391c rdf:first Nbd2cbb71c6e249a38c2bfdcce39e2a50
45 rdf:rest rdf:nil
46 anzsrc-for:2620 schema:inDefinedTermSet anzsrc-for:
47 rdf:type schema:DefinedTerm
48 sg:pub.10.1038/nature03959 schema:sameAs https://app.dimensions.ai/details/publication/pub.1021574562
49 https://doi.org/10.1038/nature03959
50 rdf:type schema:CreativeWork
51 https://doi.org/10.1006/abio.1996.0068 schema:sameAs https://app.dimensions.ai/details/publication/pub.1043308714
52 rdf:type schema:CreativeWork
53 https://doi.org/10.1016/0022-2836(80)90196-5 schema:sameAs https://app.dimensions.ai/details/publication/pub.1000526178
54 rdf:type schema:CreativeWork
55 https://doi.org/10.1073/pnas.89.5.1827 schema:sameAs https://app.dimensions.ai/details/publication/pub.1007596846
56 rdf:type schema:CreativeWork
57 https://doi.org/10.1093/bioinformatics/btl629 schema:sameAs https://app.dimensions.ai/details/publication/pub.1017299791
58 rdf:type schema:CreativeWork
59 https://doi.org/10.1093/nar/24.2.380 schema:sameAs https://app.dimensions.ai/details/publication/pub.1006466238
60 rdf:type schema:CreativeWork
61 https://doi.org/10.1093/nar/25.3.677 schema:sameAs https://app.dimensions.ai/details/publication/pub.1039638324
62 rdf:type schema:CreativeWork
63 https://doi.org/10.1101/gr.2.4.318 schema:sameAs https://app.dimensions.ai/details/publication/pub.1049824033
64 rdf:type schema:CreativeWork
65 https://doi.org/10.1126/science.2448875 schema:sameAs https://app.dimensions.ai/details/publication/pub.1062538000
66 rdf:type schema:CreativeWork
67 https://doi.org/10.1517/14622416.6.4.373 schema:sameAs https://app.dimensions.ai/details/publication/pub.1067587881
68 rdf:type schema:CreativeWork
69 https://www.grid.ac/institutes/grid.434747.7 schema:Organization
 




Preview window. Press ESC to close (or click here)


...