Ontology type: sgo:Patent
N/A
AUTHORSZHANG, QIFA , FAN, CHUCHUAN , XING, YONGZHONG
ABSTRACTThe present invention relates to an isolated major gene GS3 which regulates grain weight and grain length in the rice and the cloning of said gene. The DNA sequence of GS3 gene is as shown in SEQ ID NO. 1 and is 7883bp in length. GS3 gene comprises 5 exons and encodes 232 amino acids. It is predicted based on bioinformatics analysis that said protein contains conserved domains including a PEBP-like domain, a transmembrane domain, a cysteine-rich domain of TNFR/NGFR and a VWFC domain. cDNA sequence of said gene is as shown in SEQ ID NO. 2. By sequence alignment between three large grain species and 3 small grain species of rice, it is revealed there is only one common single nucleotide mutation in a 7.9-kb region between the two different grain-length groups. Said nucleotide mutation is located at the second exon of the GS3 gene, in which a cysteine codon (TGC) in the small-grain group is mutated to a termination codon (TGA) in the large-grain group. This mutation causes a premature termination in the large-grain group, which leads to a 178-amino acids truncation (including part of the PEBP-like domain and all the other three conserved domains). The present invention also provides methods of producing transgenic plants comprising sequences disclosed herein. More... »
JSON-LD is the canonical representation for SciGraph data.
TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT
[
{
"@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json",
"about": [
{
"id": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/2620",
"inDefinedTermSet": "http://purl.org/au-research/vocabulary/anzsrc-for/2008/",
"type": "DefinedTerm"
}
],
"author": [
{
"name": "ZHANG, QIFA",
"type": "Person"
},
{
"name": "FAN, CHUCHUAN",
"type": "Person"
},
{
"name": "XING, YONGZHONG",
"type": "Person"
}
],
"citation": [
{
"id": "https://doi.org/10.1016/s0168-9525(00)89157-x",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1013850191"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s001220051549",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1027189297",
"https://doi.org/10.1007/s001220051549"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-006-0218-1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1031700894",
"https://doi.org/10.1007/s00122-006-0218-1"
],
"type": "CreativeWork"
},
{
"id": "sg:pub.10.1007/s00122-006-0218-1",
"sameAs": [
"https://app.dimensions.ai/details/publication/pub.1031700894",
"https://doi.org/10.1007/s00122-006-0218-1"
],
"type": "CreativeWork"
}
],
"description": "The present invention relates to an isolated major gene GS3 which regulates grain weight and grain length in the rice and the cloning of said gene. The DNA sequence of GS3 gene is as shown in SEQ ID NO. 1 and is 7883bp in length. GS3 gene comprises 5 exons and encodes 232 amino acids. It is predicted based on bioinformatics analysis that said protein contains conserved domains including a PEBP-like domain, a transmembrane domain, a cysteine-rich domain of TNFR/NGFR and a VWFC domain. cDNA sequence of said gene is as shown in SEQ ID NO. 2. By sequence alignment between three large grain species and 3 small grain species of rice, it is revealed there is only one common single nucleotide mutation in a 7.9-kb region between the two different grain-length groups. Said nucleotide mutation is located at the second exon of the GS3 gene, in which a cysteine codon (TGC) in the small-grain group is mutated to a termination codon (TGA) in the large-grain group. This mutation causes a premature termination in the large-grain group, which leads to a 178-amino acids truncation (including part of the PEBP-like domain and all the other three conserved domains). The present invention also provides methods of producing transgenic plants comprising sequences disclosed herein.
",
"id": "sg:patent.EP-1969124-A1",
"keywords": [
"rice gene",
"primary control",
"invention",
"major gene",
"weight",
"Oryza sativa",
"Organism Cloning",
"gene",
"Base Sequence",
"ID",
"exon",
"amino acid",
"bioinformatic analysis",
"protein",
"conserved domain",
"domain",
"transmembrane domain",
"cysteine-rich domain",
"AS",
"cDNA sequence",
"sequence alignment",
"large grain",
"small grain",
"single nucleotide",
"kb region",
"nucleotide",
"cysteine",
"Transient Global Amnesia",
"mutation",
"premature termination",
"method",
"Genetically Modified Plant",
"sequence"
],
"name": "A RICE GENE, GS3, EXERTING PRIMARY CONTROL OVER GRAIN LENGTH AND GRAIN WEIGHT",
"recipient": [
{
"id": "https://www.grid.ac/institutes/grid.35155.37",
"type": "Organization"
}
],
"sameAs": [
"https://app.dimensions.ai/details/patent/EP-1969124-A1"
],
"sdDataset": "patents",
"sdDatePublished": "2019-03-07T15:36",
"sdLicense": "https://scigraph.springernature.com/explorer/license/",
"sdPublisher": {
"name": "Springer Nature - SN SciGraph project",
"type": "Organization"
},
"sdSource": "s3://com.uberresearch.data.dev.patents-pipeline/full_run_10/sn-export/5eb3e5a348d7f117b22cc85fb0b02730/0000100128-0000348334/json_export_c65b015e.jsonl",
"type": "Patent"
}
]
Download the RDF metadata as: json-ld nt turtle xml License info
JSON-LD is a popular format for linked data which is fully compatible with JSON.
curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/patent.EP-1969124-A1'
N-Triples is a line-based linked data format ideal for batch operations.
curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/patent.EP-1969124-A1'
Turtle is a human-readable linked data format.
curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/patent.EP-1969124-A1'
RDF/XML is a standard XML format for linked data.
curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/patent.EP-1969124-A1'
This table displays all metadata directly associated to this object as RDF triples.
73 TRIPLES
14 PREDICATES
49 URIs
40 LITERALS
2 BLANK NODES
Subject | Predicate | Object | |
---|---|---|---|
1 | sg:patent.EP-1969124-A1 | schema:about | anzsrc-for:2620 |
2 | ″ | schema:author | N3d34922114404b5690d70f056d66f41e |
3 | ″ | schema:citation | sg:pub.10.1007/s00122-006-0218-1 |
4 | ″ | ″ | sg:pub.10.1007/s001220051549 |
5 | ″ | ″ | https://doi.org/10.1016/s0168-9525(00)89157-x |
6 | ″ | schema:description | <p>The present invention relates to an isolated major gene GS3 which regulates grain weight and grain length in the rice and the cloning of said gene. The DNA sequence of GS3 gene is as shown in SEQ ID NO. 1 and is 7883bp in length. GS3 gene comprises 5 exons and encodes 232 amino acids. It is predicted based on bioinformatics analysis that said protein contains conserved domains including a PEBP-like domain, a transmembrane domain, a cysteine-rich domain of TNFR/NGFR and a VWFC domain. cDNA sequence of said gene is as shown in SEQ ID NO. 2. By sequence alignment between three large grain species and 3 small grain species of rice, it is revealed there is only one common single nucleotide mutation in a 7.9-kb region between the two different grain-length groups. Said nucleotide mutation is located at the second exon of the GS3 gene, in which a cysteine codon (TGC) in the small-grain group is mutated to a termination codon (TGA) in the large-grain group. This mutation causes a premature termination in the large-grain group, which leads to a 178-amino acids truncation (including part of the PEBP-like domain and all the other three conserved domains). The present invention also provides methods of producing transgenic plants comprising sequences disclosed herein.</p> |
7 | ″ | schema:keywords | AS |
8 | ″ | ″ | Base Sequence |
9 | ″ | ″ | Genetically Modified Plant |
10 | ″ | ″ | ID |
11 | ″ | ″ | Organism Cloning |
12 | ″ | ″ | Oryza sativa |
13 | ″ | ″ | Transient Global Amnesia |
14 | ″ | ″ | amino acid |
15 | ″ | ″ | bioinformatic analysis |
16 | ″ | ″ | cDNA sequence |
17 | ″ | ″ | conserved domain |
18 | ″ | ″ | cysteine |
19 | ″ | ″ | cysteine-rich domain |
20 | ″ | ″ | domain |
21 | ″ | ″ | exon |
22 | ″ | ″ | gene |
23 | ″ | ″ | invention |
24 | ″ | ″ | kb region |
25 | ″ | ″ | large grain |
26 | ″ | ″ | major gene |
27 | ″ | ″ | method |
28 | ″ | ″ | mutation |
29 | ″ | ″ | nucleotide |
30 | ″ | ″ | premature termination |
31 | ″ | ″ | primary control |
32 | ″ | ″ | protein |
33 | ″ | ″ | rice gene |
34 | ″ | ″ | sequence |
35 | ″ | ″ | sequence alignment |
36 | ″ | ″ | single nucleotide |
37 | ″ | ″ | small grain |
38 | ″ | ″ | transmembrane domain |
39 | ″ | ″ | weight |
40 | ″ | schema:name | A RICE GENE, GS3, EXERTING PRIMARY CONTROL OVER GRAIN LENGTH AND GRAIN WEIGHT |
41 | ″ | schema:recipient | https://www.grid.ac/institutes/grid.35155.37 |
42 | ″ | schema:sameAs | https://app.dimensions.ai/details/patent/EP-1969124-A1 |
43 | ″ | schema:sdDatePublished | 2019-03-07T15:36 |
44 | ″ | schema:sdLicense | https://scigraph.springernature.com/explorer/license/ |
45 | ″ | schema:sdPublisher | N75a7bda291894d68b5b18fd8e4954924 |
46 | ″ | sgo:license | sg:explorer/license/ |
47 | ″ | sgo:sdDataset | patents |
48 | ″ | rdf:type | sgo:Patent |
49 | N3d34922114404b5690d70f056d66f41e | rdf:first | N8852fc481abe4a9daced84e23a0a6ad1 |
50 | ″ | rdf:rest | N5c232661c4b9447992ec912217baa47f |
51 | N5c232661c4b9447992ec912217baa47f | rdf:first | Nab90c42d28e24addb78ae9bc1ee3f36d |
52 | ″ | rdf:rest | Nd89ab5aa864447cc9d9e76eafbf8538d |
53 | N75a7bda291894d68b5b18fd8e4954924 | schema:name | Springer Nature - SN SciGraph project |
54 | ″ | rdf:type | schema:Organization |
55 | N8852fc481abe4a9daced84e23a0a6ad1 | schema:name | ZHANG, QIFA |
56 | ″ | rdf:type | schema:Person |
57 | Nab90c42d28e24addb78ae9bc1ee3f36d | schema:name | FAN, CHUCHUAN |
58 | ″ | rdf:type | schema:Person |
59 | Nc18ee69ef5a24962a5e7d9f8531a4ab2 | schema:name | XING, YONGZHONG |
60 | ″ | rdf:type | schema:Person |
61 | Nd89ab5aa864447cc9d9e76eafbf8538d | rdf:first | Nc18ee69ef5a24962a5e7d9f8531a4ab2 |
62 | ″ | rdf:rest | rdf:nil |
63 | anzsrc-for:2620 | schema:inDefinedTermSet | anzsrc-for: |
64 | ″ | rdf:type | schema:DefinedTerm |
65 | sg:pub.10.1007/s00122-006-0218-1 | schema:sameAs | https://app.dimensions.ai/details/publication/pub.1031700894 |
66 | ″ | ″ | https://doi.org/10.1007/s00122-006-0218-1 |
67 | ″ | rdf:type | schema:CreativeWork |
68 | sg:pub.10.1007/s001220051549 | schema:sameAs | https://app.dimensions.ai/details/publication/pub.1027189297 |
69 | ″ | ″ | https://doi.org/10.1007/s001220051549 |
70 | ″ | rdf:type | schema:CreativeWork |
71 | https://doi.org/10.1016/s0168-9525(00)89157-x | schema:sameAs | https://app.dimensions.ai/details/publication/pub.1013850191 |
72 | ″ | rdf:type | schema:CreativeWork |
73 | https://www.grid.ac/institutes/grid.35155.37 | ″ | schema:Organization |