RNA decay


Ontology type: npg:Subject  | skos:Concept     


Concept Info

NAME

RNA decay

DESCRIPTION

RNA decay is the process by which ribonucleic acid (RNA) molecules are enzymatically degraded. RNA decay is a regulated event and serves to control levels of particular RNA molecules. A specific example is nonsense-mediated mRNA decay (NMD), a process that eliminates transcripts containing premature stop codons.

Broader Concepts

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "id": "http://scigraph.springernature.com/ontologies/subjects/rna-decay", 
    "rdfs:label": "RNA decay", 
    "sdDataset": "onto_subjects", 
    "skos:altLabel": [
      {
        "@language": "en", 
        "@value": "RNA Instability"
      }, 
      {
        "@language": "en", 
        "@value": "mRNA Degradation"
      }, 
      {
        "@language": "en", 
        "@value": "mRNA Instability"
      }, 
      {
        "@language": "en", 
        "@value": "mRNA Transcript Degradation"
      }, 
      {
        "@language": "en", 
        "@value": "mRNA Decay"
      }, 
      {
        "@language": "en", 
        "@value": "mRNA Stability"
      }, 
      {
        "@language": "en", 
        "@value": "RNA Degradation"
      }, 
      {
        "@language": "en", 
        "@value": "RNA Stability"
      }
    ], 
    "skos:broader": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/rna-metabolism"
      }
    ], 
    "skos:definition": [
      {
        "@language": "en", 
        "@value": "RNA decay is the process by which ribonucleic acid (RNA) molecules are enzymatically degraded. RNA decay is a regulated event and serves to control levels of particular RNA molecules. A specific example is nonsense-mediated mRNA decay (NMD), a process that eliminates transcripts containing premature stop codons."
      }
    ], 
    "skos:inScheme": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/"
      }
    ], 
    "skos:prefLabel": [
      {
        "@language": "en", 
        "@value": "RNA decay"
      }
    ], 
    "type": [
      "http://ns.nature.com/terms/Subject", 
      "http://www.w3.org/2004/02/skos/core#Concept"
    ]
  }, 
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "id": "http://scigraph.springernature.com/ontologies/subjects/rna-metabolism", 
    "rdfs:label": "RNA metabolism", 
    "sdDataset": "onto_subjects", 
    "skos:broader": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/molecular-biology"
      }
    ], 
    "skos:definition": [
      {
        "@language": "en", 
        "@value": "RNA metabolism refers to any events in the life cycle of ribonucleic acid (RNA) molecules, including their synthesis, folding/unfolding, modification, processing and degradation."
      }
    ], 
    "skos:inScheme": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/"
      }
    ], 
    "skos:narrower": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/rna-folding"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/rna-splicing"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/rna-editing"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/rna-modification"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/rna-quality-control"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/rna-transport"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/rna-decay"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/alternative-splicing"
      }
    ], 
    "skos:prefLabel": [
      {
        "@language": "en", 
        "@value": "RNA metabolism"
      }
    ], 
    "type": [
      "http://ns.nature.com/terms/Subject", 
      "http://www.w3.org/2004/02/skos/core#Concept"
    ]
  }, 
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "id": "http://www.w3.org/2004/02/skos/core#Concept", 
    "rdfs:subClassOf": [
      {
        "id": "http://www.w3.org/2004/02/skos/core#Concept"
      }, 
      {
        "id": "http://www.w3.org/2000/01/rdf-schema#Resource"
      }
    ], 
    "sdDataset": "for_codes", 
    "type": [
      "http://www.w3.org/2000/01/rdf-schema#Resource", 
      "http://www.w3.org/2000/01/rdf-schema#Class"
    ]
  }, 
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "dcterms:description": [
      {
        "@language": "en", 
        "@value": "The Nature Subjects Taxonomy is a polyhierarchical categorization of scholarly subject areas which are used for the indexing of content by Springer Nature."
      }
    ], 
    "dcterms:title": [
      {
        "@language": "en", 
        "@value": "Nature Subjects Taxonomy"
      }
    ], 
    "id": "http://scigraph.springernature.com/ontologies/subjects/", 
    "sdDataset": "onto_subjects", 
    "skos:hasTopConcept": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/physical-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/DEPRECATED"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/business-and-commerce"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/humanities"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/social-science"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/health-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/scientific-community-and-society"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/earth-and-environmental-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/biological-sciences"
      }
    ], 
    "type": [
      "http://www.w3.org/2004/02/skos/core#ConceptScheme"
    ]
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/ontologies/subjects/rna-decay'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/ontologies/subjects/rna-decay'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/ontologies/subjects/rna-decay'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/ontologies/subjects/rna-decay'


 

This table displays all metadata directly associated to this object as RDF triples.

51 TRIPLES      9 PREDICATES      18 URIs      12 LITERALS

Subject Predicate Object
1 sg:ontologies/subjects/rna-decay sgo:license sg:explorer/license/
2 sgo:sdDataset onto_subjects
3 rdf:type npg:Subject
4 skos:Concept
5 rdfs:label RNA decay
6 skos:altLabel RNA Degradation
7 RNA Instability
8 RNA Stability
9 mRNA Decay
10 mRNA Degradation
11 mRNA Instability
12 mRNA Stability
13 mRNA Transcript Degradation
14 skos:broader sg:ontologies/subjects/rna-metabolism
15 skos:definition RNA decay is the process by which ribonucleic acid (RNA) molecules are enzymatically degraded. RNA decay is a regulated event and serves to control levels of particular RNA molecules. A specific example is nonsense-mediated mRNA decay (NMD), a process that eliminates transcripts containing premature stop codons.
16 skos:inScheme sg:ontologies/subjects/
17 skos:prefLabel RNA decay
18 sg:ontologies/subjects/ dcterms:description The Nature Subjects Taxonomy is a polyhierarchical categorization of scholarly subject areas which are used for the indexing of content by Springer Nature.
19 dcterms:title Nature Subjects Taxonomy
20 sgo:sdDataset onto_subjects
21 rdf:type skos:ConceptScheme
22 skos:hasTopConcept sg:ontologies/subjects/DEPRECATED
23 sg:ontologies/subjects/biological-sciences
24 sg:ontologies/subjects/business-and-commerce
25 sg:ontologies/subjects/earth-and-environmental-sciences
26 sg:ontologies/subjects/health-sciences
27 sg:ontologies/subjects/humanities
28 sg:ontologies/subjects/physical-sciences
29 sg:ontologies/subjects/scientific-community-and-society
30 sg:ontologies/subjects/social-science
31 sg:ontologies/subjects/rna-metabolism sgo:sdDataset onto_subjects
32 rdf:type npg:Subject
33 skos:Concept
34 rdfs:label RNA metabolism
35 skos:broader sg:ontologies/subjects/molecular-biology
36 skos:definition RNA metabolism refers to any events in the life cycle of ribonucleic acid (RNA) molecules, including their synthesis, folding/unfolding, modification, processing and degradation.
37 skos:inScheme sg:ontologies/subjects/
38 skos:narrower sg:ontologies/subjects/alternative-splicing
39 sg:ontologies/subjects/rna-decay
40 sg:ontologies/subjects/rna-editing
41 sg:ontologies/subjects/rna-folding
42 sg:ontologies/subjects/rna-modification
43 sg:ontologies/subjects/rna-quality-control
44 sg:ontologies/subjects/rna-splicing
45 sg:ontologies/subjects/rna-transport
46 skos:prefLabel RNA metabolism
47 skos:Concept sgo:sdDataset for_codes
48 rdf:type rdfs:Class
49 rdfs:Resource
50 rdfs:subClassOf rdfs:Resource
51 skos:Concept
 




Preview window. Press ESC to close (or click here)


...