Metagenomics


Ontology type: npg:Subject  | skos:Concept     


Concept Info

NAME

Metagenomics

DESCRIPTION

Metagenomics is the study of the metagenome—the collective genome of microorganisms from an environmental sample—to provide information on the microbial diversity and ecology of a specific environment. Shotgun metagenomics refers to the approach of shearing DNA extracted from the environmental sample and sequencing the small fragments.

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Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/ontologies/subjects/metagenomics'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/ontologies/subjects/metagenomics'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/ontologies/subjects/metagenomics'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/ontologies/subjects/metagenomics'


 

This table displays all metadata directly associated to this object as RDF triples.

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67 sg:ontologies/subjects/bacterial-secretion
68 sg:ontologies/subjects/bacterial-structural-biology
69 sg:ontologies/subjects/bacterial-synthetic-biology
70 sg:ontologies/subjects/bacterial-systems-biology
71 sg:ontologies/subjects/bacterial-techniques-and-applications
72 sg:ontologies/subjects/bacterial-toxins
73 sg:ontologies/subjects/bacterial-transcription
74 sg:ontologies/subjects/cellular-microbiology
75 sg:ontologies/subjects/infectious-disease-epidemiology
76 sg:ontologies/subjects/marine-microbiology
77 sg:ontologies/subjects/metagenomics
78 sg:ontologies/subjects/symbiosis
79 skos:prefLabel Bacteria
80 sg:ontologies/subjects/communities sgo:sdDataset onto_subjects
81 rdf:type npg:Subject
82 skos:Concept
83 rdfs:label Microbial communities
84 skos:broader sg:ontologies/subjects/microbiology
85 skos:definition Microbial communities are groups of microorganisms that share a common living space. The microbial populations that form the community can interact in different ways, for example as predators and prey or as symbionts.
86 skos:inScheme sg:ontologies/subjects/
87 skos:narrower sg:ontologies/subjects/clinical-microbiology
88 sg:ontologies/subjects/metagenomics
89 sg:ontologies/subjects/microbial-ecology
90 sg:ontologies/subjects/microbiome
91 sg:ontologies/subjects/symbiosis
92 skos:prefLabel Microbial communities
93 sg:ontologies/subjects/genomics sgo:sdDataset onto_subjects
94 rdf:type npg:Subject
95 skos:Concept
96 rdfs:label Genomics
97 skos:broader sg:ontologies/subjects/biotechnology
98 sg:ontologies/subjects/genetics
99 skos:definition Genomics is the study of the full genetic complement of an organism (the genome). It employs recombinant DNA, DNA sequencing methods, and bioinformatics to sequence, assemble, and analyse the structure and function of genomes.
100 skos:inScheme sg:ontologies/subjects/
101 skos:narrower sg:ontologies/subjects/comparative-genomics
102 sg:ontologies/subjects/conservation-genomics
103 sg:ontologies/subjects/epigenomics
104 sg:ontologies/subjects/genome-assembly-algorithms
105 sg:ontologies/subjects/genome-evolution
106 sg:ontologies/subjects/medical-genomics
107 sg:ontologies/subjects/metagenomics
108 sg:ontologies/subjects/mobile-elements
109 sg:ontologies/subjects/nutrigenomics
110 sg:ontologies/subjects/personalized-medicine
111 sg:ontologies/subjects/pharmacogenomics
112 sg:ontologies/subjects/phylogenomics
113 sg:ontologies/subjects/transcriptomics
114 skos:prefLabel Genomics
115 sg:ontologies/subjects/virology sgo:sdDataset onto_subjects
116 rdf:type npg:Subject
117 skos:Concept
118 rdfs:label Virology
119 skos:broader sg:ontologies/subjects/microbiology
120 skos:definition Virology is the scientific discipline concerned with the study of the biology of viruses and viral diseases, including the distribution, biochemistry, physiology, molecular biology, ecology, evolution and clinical aspects of viruses.
121 skos:inScheme sg:ontologies/subjects/
122 skos:narrower sg:ontologies/subjects/adenovirus
123 sg:ontologies/subjects/alphaviruses
124 sg:ontologies/subjects/antivirals
125 sg:ontologies/subjects/arenaviruses
126 sg:ontologies/subjects/dengue-virus
127 sg:ontologies/subjects/ebola-virus
128 sg:ontologies/subjects/hepatitis-b-virus
129 sg:ontologies/subjects/hepatitis-c-virus
130 sg:ontologies/subjects/herpes-virus
131 sg:ontologies/subjects/htlv
132 sg:ontologies/subjects/human-papilloma-virus
133 sg:ontologies/subjects/influenza-virus
134 sg:ontologies/subjects/marburg-virus
135 sg:ontologies/subjects/measles-virus
136 sg:ontologies/subjects/metagenomics
137 sg:ontologies/subjects/phage-biology
138 sg:ontologies/subjects/pox-virus
139 sg:ontologies/subjects/restriction-factors
140 sg:ontologies/subjects/retrovirus
141 sg:ontologies/subjects/rotavirus
142 sg:ontologies/subjects/sars-virus
143 sg:ontologies/subjects/viral-epidemiology
144 sg:ontologies/subjects/viral-evolution
145 sg:ontologies/subjects/viral-host-response
146 sg:ontologies/subjects/viral-immune-evasion
147 sg:ontologies/subjects/viral-membrane-fusion
148 sg:ontologies/subjects/viral-pathogenesis
149 sg:ontologies/subjects/viral-reservoirs
150 sg:ontologies/subjects/viral-systems-biology
151 sg:ontologies/subjects/viral-transmission
152 sg:ontologies/subjects/viral-vectors
153 sg:ontologies/subjects/virus-host-interactions
154 sg:ontologies/subjects/virus-structures
155 sg:ontologies/subjects/west-nile-virus
156 skos:prefLabel Virology
157 skos:Concept sgo:sdDataset for_codes
158 rdf:type rdfs:Class
159 rdfs:Resource
160 rdfs:subClassOf rdfs:Resource
161 skos:Concept
 




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