Metabolomics


Ontology type: npg:Subject  | skos:Concept     


Concept Info

NAME

Metabolomics

DESCRIPTION

Metabolomics refers to the systematic identification and quantification of the small molecule metabolic products (the metabolome) of a biological system (cell, tissue, organ, biological fluid, or organism) at a specific point in time. Mass spectrometry and NMR spectroscopy are the techniques most often used for metabolome profiling.

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        "id": "http://scigraph.springernature.com/ontologies/subjects/networks-and-systems-biology"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/proteins"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/natural-products"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/biophysical-chemistry"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/synthetic-biology"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/enzymes"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/membranes"
      }
    ], 
    "skos:prefLabel": [
      {
        "@language": "en", 
        "@value": "Chemical biology"
      }
    ], 
    "type": [
      "http://ns.nature.com/terms/Subject", 
      "http://www.w3.org/2004/02/skos/core#Concept"
    ]
  }, 
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "id": "http://www.w3.org/2004/02/skos/core#Concept", 
    "rdfs:subClassOf": [
      {
        "id": "http://www.w3.org/2004/02/skos/core#Concept"
      }, 
      {
        "id": "http://www.w3.org/2000/01/rdf-schema#Resource"
      }
    ], 
    "sdDataset": "for_codes", 
    "type": [
      "http://www.w3.org/2000/01/rdf-schema#Resource", 
      "http://www.w3.org/2000/01/rdf-schema#Class"
    ]
  }, 
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "dcterms:description": [
      {
        "@language": "en", 
        "@value": "The Nature Subjects Taxonomy is a polyhierarchical categorization of scholarly subject areas which are used for the indexing of content by Springer Nature."
      }
    ], 
    "dcterms:title": [
      {
        "@language": "en", 
        "@value": "Nature Subjects Taxonomy"
      }
    ], 
    "id": "http://scigraph.springernature.com/ontologies/subjects/", 
    "sdDataset": "onto_subjects", 
    "skos:hasTopConcept": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/physical-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/DEPRECATED"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/business-and-commerce"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/humanities"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/social-science"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/health-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/scientific-community-and-society"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/earth-and-environmental-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/biological-sciences"
      }
    ], 
    "type": [
      "http://www.w3.org/2004/02/skos/core#ConceptScheme"
    ]
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/ontologies/subjects/metabolomics'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/ontologies/subjects/metabolomics'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/ontologies/subjects/metabolomics'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/ontologies/subjects/metabolomics'


 

This table displays all metadata directly associated to this object as RDF triples.

232 TRIPLES      9 PREDICATES      17 URIs      7 LITERALS

Subject Predicate Object
1 sg:ontologies/subjects/metabolomics sgo:license sg:explorer/license/
2 sgo:sdDataset onto_subjects
3 rdf:type npg:Subject
4 skos:Concept
5 rdfs:label Metabolomics
6 skos:altLabel Metabolomic
7 Metabonomic
8 Metabonomics
9 skos:broader sg:ontologies/subjects/biochemistry
10 sg:ontologies/subjects/biological-techniques
11 sg:ontologies/subjects/biotechnology
12 sg:ontologies/subjects/chemical-biology
13 sg:ontologies/subjects/metabolism
14 skos:definition Metabolomics refers to the systematic identification and quantification of the small molecule metabolic products (the metabolome) of a biological system (cell, tissue, organ, biological fluid, or organism) at a specific point in time. Mass spectrometry and NMR spectroscopy are the techniques most often used for metabolome profiling.
15 skos:inScheme sg:ontologies/subjects/
16 skos:prefLabel Metabolomics
17 sg:ontologies/subjects/ dcterms:description The Nature Subjects Taxonomy is a polyhierarchical categorization of scholarly subject areas which are used for the indexing of content by Springer Nature.
18 dcterms:title Nature Subjects Taxonomy
19 sgo:sdDataset onto_subjects
20 rdf:type skos:ConceptScheme
21 skos:hasTopConcept sg:ontologies/subjects/DEPRECATED
22 sg:ontologies/subjects/biological-sciences
23 sg:ontologies/subjects/business-and-commerce
24 sg:ontologies/subjects/earth-and-environmental-sciences
25 sg:ontologies/subjects/health-sciences
26 sg:ontologies/subjects/humanities
27 sg:ontologies/subjects/physical-sciences
28 sg:ontologies/subjects/scientific-community-and-society
29 sg:ontologies/subjects/social-science
30 sg:ontologies/subjects/biochemistry sgo:sdDataset onto_subjects
31 rdf:type npg:Subject
32 skos:Concept
33 rdfs:label Biochemistry
34 skos:altLabel Biological Chemistry
35 skos:broader sg:ontologies/subjects/biological-sciences
36 sg:ontologies/subjects/chemistry
37 skos:definition Biochemistry is the study of the structure and function of biological molecules such as proteins, nucleic acids, carbohydrates and lipids. Biochemistry is also used to describe techniques suited to understanding the interactions and functions of biological molecules, including traditional techniques such as Western blotting, co-immunoprecipitation, and chromatography methods.
38 skos:inScheme sg:ontologies/subjects/
39 skos:narrower sg:ontologies/subjects/biocatalysis
40 sg:ontologies/subjects/biogeochemistry
41 sg:ontologies/subjects/bioinorganic-chemistry
42 sg:ontologies/subjects/biophysical-chemistry
43 sg:ontologies/subjects/carbohydrates
44 sg:ontologies/subjects/chemical-modification
45 sg:ontologies/subjects/cytokines
46 sg:ontologies/subjects/dna
47 sg:ontologies/subjects/enzyme-mechanisms
48 sg:ontologies/subjects/enzymes
49 sg:ontologies/subjects/glycobiology
50 sg:ontologies/subjects/glycomics
51 sg:ontologies/subjects/histocytochemistry
52 sg:ontologies/subjects/hormones
53 sg:ontologies/subjects/immunochemistry
54 sg:ontologies/subjects/ion-channels
55 sg:ontologies/subjects/isoenzymes
56 sg:ontologies/subjects/kinases
57 sg:ontologies/subjects/lipidomics
58 sg:ontologies/subjects/lipids
59 sg:ontologies/subjects/metabolomics
60 sg:ontologies/subjects/metals
61 sg:ontologies/subjects/neurochemistry
62 sg:ontologies/subjects/peptides
63 sg:ontologies/subjects/prions
64 sg:ontologies/subjects/proteases
65 sg:ontologies/subjects/protein-folding
66 sg:ontologies/subjects/proteins
67 sg:ontologies/subjects/proteolysis
68 sg:ontologies/subjects/proteomics
69 sg:ontologies/subjects/rna
70 sg:ontologies/subjects/structural-biology
71 skos:prefLabel Biochemistry
72 sg:ontologies/subjects/biological-techniques sgo:sdDataset onto_subjects
73 rdf:type npg:Subject
74 skos:Concept
75 rdfs:label Biological techniques
76 skos:altLabel Methodological Studies
77 Methodological Study
78 Methods
79 Procedure
80 Procedures
81 skos:broader sg:ontologies/subjects/biological-sciences
82 skos:definition Biological techniques are methods or procedures that are used to study living things. They include experimental and computational methods, approaches, protocols and tools for biological research.
83 skos:inScheme sg:ontologies/subjects/
84 skos:narrower sg:ontologies/subjects/analytical-biochemistry
85 sg:ontologies/subjects/behavioural-methods
86 sg:ontologies/subjects/bioinformatics
87 sg:ontologies/subjects/biological-models
88 sg:ontologies/subjects/biophysical-methods
89 sg:ontologies/subjects/cytological-techniques
90 sg:ontologies/subjects/electrophysiology
91 sg:ontologies/subjects/epigenetics-analysis
92 sg:ontologies/subjects/experimental-organisms
93 sg:ontologies/subjects/gene-delivery
94 sg:ontologies/subjects/gene-expression-analysis
95 sg:ontologies/subjects/genetic-engineering
96 sg:ontologies/subjects/genetic-techniques
97 sg:ontologies/subjects/genomic-analysis
98 sg:ontologies/subjects/high-throughput-screening
99 sg:ontologies/subjects/imaging
100 sg:ontologies/subjects/immunological-techniques
101 sg:ontologies/subjects/isolation-separation-purification
102 sg:ontologies/subjects/lab-on-a-chip
103 sg:ontologies/subjects/mass-spectrometry
104 sg:ontologies/subjects/metabolomics
105 sg:ontologies/subjects/microbiology-techniques
106 sg:ontologies/subjects/microscopy
107 sg:ontologies/subjects/molecular-engineering
108 sg:ontologies/subjects/nanobiotechnology
109 sg:ontologies/subjects/optogenetics
110 sg:ontologies/subjects/proteomic-analysis
111 sg:ontologies/subjects/sensors-and-probes
112 sg:ontologies/subjects/sequencing
113 sg:ontologies/subjects/software
114 sg:ontologies/subjects/spectroscopy
115 sg:ontologies/subjects/structure-determination
116 skos:prefLabel Biological techniques
117 sg:ontologies/subjects/biotechnology sgo:sdDataset onto_subjects
118 rdf:type npg:Subject
119 skos:Concept
120 rdfs:label Biotechnology
121 skos:altLabel Biotechnologies
122 skos:broader sg:ontologies/subjects/biological-sciences
123 skos:definition Biotechnology is a broad discipline in which biological processes, organisms, cells or cellular components are exploited to develop new technologies. New tools and products developed by biotechnologists are useful in research, agriculture, industry and the clinic.
124 skos:inScheme sg:ontologies/subjects/
125 skos:narrower sg:ontologies/subjects/animal-biotechnology
126 sg:ontologies/subjects/applied-immunology
127 sg:ontologies/subjects/assay-systems
128 sg:ontologies/subjects/biologics
129 sg:ontologies/subjects/biomaterials
130 sg:ontologies/subjects/biomimetics
131 sg:ontologies/subjects/cell-delivery
132 sg:ontologies/subjects/environmental-biotechnology
133 sg:ontologies/subjects/expression-systems
134 sg:ontologies/subjects/functional-genomics
135 sg:ontologies/subjects/gene-delivery
136 sg:ontologies/subjects/gene-therapy
137 sg:ontologies/subjects/genomics
138 sg:ontologies/subjects/industrial-microbiology
139 sg:ontologies/subjects/metabolic-engineering
140 sg:ontologies/subjects/metabolomics
141 sg:ontologies/subjects/molecular-engineering
142 sg:ontologies/subjects/nanobiotechnology
143 sg:ontologies/subjects/nucleic-acid-therapeutics
144 sg:ontologies/subjects/oligo-delivery
145 sg:ontologies/subjects/peptide-delivery
146 sg:ontologies/subjects/plant-biotechnology
147 sg:ontologies/subjects/protein-delivery
148 sg:ontologies/subjects/proteomics
149 sg:ontologies/subjects/regenerative-medicine
150 sg:ontologies/subjects/sequencing
151 sg:ontologies/subjects/stem-cell-biotechnology
152 sg:ontologies/subjects/tissue-engineering
153 skos:prefLabel Biotechnology
154 sg:ontologies/subjects/chemical-biology sgo:sdDataset onto_subjects
155 rdf:type npg:Subject
156 skos:Concept
157 rdfs:label Chemical biology
158 skos:broader sg:ontologies/subjects/biological-sciences
159 sg:ontologies/subjects/chemistry
160 skos:definition Chemical biology is the study of the chemicals and chemical reactions involved in biological processes, incorporating the disciplines of bioorganic chemistry, biochemistry, cell biology and pharmacology. Chemicals – including natural small molecules, such as lipids, carbohydrates and metals, or non-natural probe or drug molecules – are used to gain insight into biological problems at a mechanistic level.
161 skos:inScheme sg:ontologies/subjects/
162 skos:narrower sg:ontologies/subjects/biocatalysis
163 sg:ontologies/subjects/biophysical-chemistry
164 sg:ontologies/subjects/biosynthesis
165 sg:ontologies/subjects/carbohydrates
166 sg:ontologies/subjects/chemical-ecology
167 sg:ontologies/subjects/chemical-genetics
168 sg:ontologies/subjects/chemical-libraries
169 sg:ontologies/subjects/chemical-modification
170 sg:ontologies/subjects/chemical-tools
171 sg:ontologies/subjects/cheminformatics
172 sg:ontologies/subjects/combinatorial-libraries
173 sg:ontologies/subjects/computational-chemistry
174 sg:ontologies/subjects/dna
175 sg:ontologies/subjects/drug-delivery
176 sg:ontologies/subjects/enzyme-mechanisms
177 sg:ontologies/subjects/enzymes
178 sg:ontologies/subjects/glycobiology
179 sg:ontologies/subjects/glycomics
180 sg:ontologies/subjects/ion-channels
181 sg:ontologies/subjects/kinases
182 sg:ontologies/subjects/lipidomics
183 sg:ontologies/subjects/lipids
184 sg:ontologies/subjects/mechanism-of-action
185 sg:ontologies/subjects/membranes
186 sg:ontologies/subjects/metabolic-pathways
187 sg:ontologies/subjects/metabolomics
188 sg:ontologies/subjects/metals
189 sg:ontologies/subjects/natural-products
190 sg:ontologies/subjects/networks-and-systems-biology
191 sg:ontologies/subjects/nucleic-acids
192 sg:ontologies/subjects/peptides
193 sg:ontologies/subjects/pharmacology
194 sg:ontologies/subjects/post-translational-modifications
195 sg:ontologies/subjects/proteases
196 sg:ontologies/subjects/protein-design
197 sg:ontologies/subjects/protein-folding
198 sg:ontologies/subjects/proteins
199 sg:ontologies/subjects/proteomics
200 sg:ontologies/subjects/rna
201 sg:ontologies/subjects/screening
202 sg:ontologies/subjects/small-molecules
203 sg:ontologies/subjects/synthetic-biology
204 sg:ontologies/subjects/target-identification
205 sg:ontologies/subjects/target-validation
206 sg:ontologies/subjects/transporters
207 skos:prefLabel Chemical biology
208 sg:ontologies/subjects/metabolism sgo:sdDataset onto_subjects
209 rdf:type npg:Subject
210 skos:Concept
211 rdfs:label Metabolism
212 skos:altLabel Anabolism
213 Catabolism
214 Metabolic Process
215 Metabolic Processes
216 skos:broader sg:ontologies/subjects/physiology
217 skos:definition Metabolism refers to the chemical reactions that occur within an organism to sustain life. The reactions are divided into two categories: catabolism (the breakdown of organic matter to produce energy); and anabolism (the construction of molecules from smaller units).
218 skos:inScheme sg:ontologies/subjects/
219 skos:narrower sg:ontologies/subjects/fat-metabolism
220 sg:ontologies/subjects/feeding-behaviour
221 sg:ontologies/subjects/homeostasis
222 sg:ontologies/subjects/metabolic-diseases
223 sg:ontologies/subjects/metabolomics
224 sg:ontologies/subjects/mitochondria
225 sg:ontologies/subjects/neuroendocrinology
226 sg:ontologies/subjects/thyroid-gland
227 skos:prefLabel Metabolism
228 skos:Concept sgo:sdDataset for_codes
229 rdf:type rdfs:Class
230 rdfs:Resource
231 rdfs:subClassOf rdfs:Resource
232 skos:Concept
 




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