Genomics


Ontology type: npg:Subject  | skos:Concept     


Concept Info

NAME

Genomics

DESCRIPTION

Genomics is the study of the full genetic complement of an organism (the genome). It employs recombinant DNA, DNA sequencing methods, and bioinformatics to sequence, assemble, and analyse the structure and function of genomes.

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Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/ontologies/subjects/genomics'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/ontologies/subjects/genomics'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/ontologies/subjects/genomics'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/ontologies/subjects/genomics'


 

This table displays all metadata directly associated to this object as RDF triples.

270 TRIPLES      9 PREDICATES      24 URIs      4 LITERALS

Subject Predicate Object
1 sg:ontologies/subjects/genomics sgo:license sg:explorer/license/
2 sgo:sdDataset onto_subjects
3 rdf:type npg:Subject
4 skos:Concept
5 rdfs:label Genomics
6 skos:broader sg:ontologies/subjects/biotechnology
7 sg:ontologies/subjects/genetics
8 skos:definition Genomics is the study of the full genetic complement of an organism (the genome). It employs recombinant DNA, DNA sequencing methods, and bioinformatics to sequence, assemble, and analyse the structure and function of genomes.
9 skos:inScheme sg:ontologies/subjects/
10 skos:narrower sg:ontologies/subjects/comparative-genomics
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15 sg:ontologies/subjects/medical-genomics
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17 sg:ontologies/subjects/mobile-elements
18 sg:ontologies/subjects/nutrigenomics
19 sg:ontologies/subjects/personalized-medicine
20 sg:ontologies/subjects/pharmacogenomics
21 sg:ontologies/subjects/phylogenomics
22 sg:ontologies/subjects/transcriptomics
23 skos:prefLabel Genomics
24 sg:ontologies/subjects/ dcterms:description The Nature Subjects Taxonomy is a polyhierarchical categorization of scholarly subject areas which are used for the indexing of content by Springer Nature.
25 dcterms:title Nature Subjects Taxonomy
26 sgo:sdDataset onto_subjects
27 rdf:type skos:ConceptScheme
28 skos:hasTopConcept sg:ontologies/subjects/DEPRECATED
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37 sg:ontologies/subjects/biotechnology sgo:sdDataset onto_subjects
38 rdf:type npg:Subject
39 skos:Concept
40 rdfs:label Biotechnology
41 skos:altLabel Biotechnologies
42 skos:broader sg:ontologies/subjects/biological-sciences
43 skos:definition Biotechnology is a broad discipline in which biological processes, organisms, cells or cellular components are exploited to develop new technologies. New tools and products developed by biotechnologists are useful in research, agriculture, industry and the clinic.
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62 sg:ontologies/subjects/nanobiotechnology
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76 skos:Concept
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80 skos:definition Comparative genomics deals with the processes of evolution via the alignment and analysis of genes and genomes of living or extinct organisms related by varying degrees of evolutionary divergence from a common ancestor. Comparisons are usually made pairwise with reference to a third genome 'outgroup' or by examination of pairs of paired sequences and summarized in phylogenetic trees.
81 skos:inScheme sg:ontologies/subjects/
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84 rdf:type npg:Subject
85 skos:Concept
86 rdfs:label Conservation genomics
87 skos:broader sg:ontologies/subjects/genomics
88 skos:definition Conservation genomics is the application of genomic analysis to the preservation of the viability of populations and the biodiversity of living organisms. Genomic methods can be used to argue species identity, degree of hybridization, genetic diversity, demographic history and effective population size.
89 skos:inScheme sg:ontologies/subjects/
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101 skos:inScheme sg:ontologies/subjects/
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104 rdf:type npg:Subject
105 skos:Concept
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108 skos:definition Genetics is the branch of science concerned with genes, heredity, and variation in living organisms. It seeks to understand the process of trait inheritance from parents to offspring, including the molecular structure and function of genes, gene behaviour in the context of a cell or organism (e.g. dominance and epigenetics), gene distribution, and variation and change in populations.
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153 skos:prefLabel Genetics
154 sg:ontologies/subjects/genome-assembly-algorithms sgo:sdDataset onto_subjects
155 rdf:type npg:Subject
156 skos:Concept
157 rdfs:label Genome assembly algorithms
158 skos:broader sg:ontologies/subjects/genome-informatics
159 sg:ontologies/subjects/genomics
160 skos:definition Genome assembly algorithms are sets of well defined procedures for reconstructing DNA sequences from large numbers of shorter DNA sequence fragments. Fragments are aligned against one another and overlapping sections are identified and merged.
161 skos:inScheme sg:ontologies/subjects/
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163 sg:ontologies/subjects/genome-evolution sgo:sdDataset onto_subjects
164 rdf:type npg:Subject
165 skos:Concept
166 rdfs:label Genome evolution
167 skos:altLabel Genomic evolution
168 skos:broader sg:ontologies/subjects/genomics
169 skos:definition Genome evolution is the process by which a genome changes in structure over time, through mutation, horizontal gene transfer, and sexual reproduction. The study of genome evolution involves multiple fields including structural analysis of the genome, genomic parasites, gene and ancient genome duplications, polyploidy, and comparative genomics.
170 skos:inScheme sg:ontologies/subjects/
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172 sg:ontologies/subjects/medical-genomics sgo:sdDataset onto_subjects
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175 rdfs:label Medical genomics
176 skos:broader sg:ontologies/subjects/genomics
177 skos:definition Medical genomics is the application and integration of genomic and other data—including functional genomics, genome structure, genome-scale population genetics, epigenomics, proteomics, systems analysis and pharmacogenomics—to better understand the genetic bases of drug response and disease.
178 skos:inScheme sg:ontologies/subjects/
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180 sg:ontologies/subjects/metagenomics sgo:sdDataset onto_subjects
181 rdf:type npg:Subject
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189 sg:ontologies/subjects/bacteria
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193 skos:definition Metagenomics is the study of the metagenome—the collective genome of microorganisms from an environmental sample—to provide information on the microbial diversity and ecology of a specific environment. Shotgun metagenomics refers to the approach of shearing DNA extracted from the environmental sample and sequencing the small fragments.
194 skos:inScheme sg:ontologies/subjects/
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201 skos:definition Mobile elements are DNA sequences that can move around the genome, changing their number of copies or simply changing their location, often affecting the activity of nearby genes. They include DNA transposable elements, plasmids and bacteriophage elements. The total of all mobile genetic elements in a genome may be referred to as the mobilome.
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213 skos:definition Nutrigenomics is the study of the effects of food and food constituents on gene expression, and how genetic variations affect the nutritional environment. It focuses on understanding the interaction between nutrients and other dietary bioactives with the genome at the molecular level, to understand how specific nutrients or dietary regimes may affect human health.
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