Chromatin remodelling


Ontology type: npg:Subject  | skos:Concept     


Concept Info

NAME

Chromatin remodelling

DESCRIPTION

Chromatin remodelling is the process by which the DNA wrapped within nucleosomes becomes accessible to regulatory elements, such as transcription factors and the replication machinery. Chromatin remodelling can result from covalent modification of histones by histone acetyltransferases, histone deacetylases, histone methyltransferases or kinases, and by ATP-dependent protein complexes that physically remodel, move or remove nucleosomes.

Broader Concepts

JSON-LD is the canonical representation for SciGraph data.

TIP: You can open this SciGraph record using an external JSON-LD service: JSON-LD Playground Google SDTT

[
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "id": "http://scigraph.springernature.com/ontologies/subjects/chromatin-remodelling", 
    "rdfs:label": "Chromatin remodelling", 
    "sdDataset": "onto_subjects", 
    "skos:altLabel": [
      {
        "@language": "en", 
        "@value": "Chromatin Assembly"
      }, 
      {
        "@language": "en", 
        "@value": "Chromatin Disassemblies"
      }, 
      {
        "@language": "en", 
        "@value": "Chromatin Remodeling"
      }, 
      {
        "@language": "en", 
        "@value": "Chromatin Modeling"
      }, 
      {
        "@language": "en", 
        "@value": "Chromatin Disassembly"
      }, 
      {
        "@language": "en", 
        "@value": "Chromatin Assembly and Disassembly"
      }
    ], 
    "skos:broader": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/chromatin"
      }
    ], 
    "skos:definition": [
      {
        "@language": "en", 
        "@value": "Chromatin remodelling is the process by which the DNA wrapped within nucleosomes becomes accessible to regulatory elements, such as transcription factors and the replication machinery. Chromatin remodelling can result from covalent modification of histones by histone acetyltransferases, histone deacetylases, histone methyltransferases or kinases, and by ATP-dependent protein complexes that physically remodel, move or remove nucleosomes."
      }
    ], 
    "skos:inScheme": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/"
      }
    ], 
    "skos:prefLabel": [
      {
        "@language": "en", 
        "@value": "Chromatin remodelling"
      }
    ], 
    "type": [
      "http://www.w3.org/2004/02/skos/core#Concept", 
      "http://ns.nature.com/terms/Subject"
    ]
  }, 
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "id": "http://scigraph.springernature.com/ontologies/subjects/chromatin", 
    "rdfs:label": "Chromatin", 
    "sdDataset": "onto_subjects", 
    "skos:altLabel": [
      {
        "@language": "en", 
        "@value": "Chromatins"
      }
    ], 
    "skos:broader": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/molecular-biology"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/proteins"
      }
    ], 
    "skos:definition": [
      {
        "@language": "en", 
        "@value": "Chromatin is a flexibly joined chain of nucleosomes that exists inside the nucleus of eukaryotic cells and has been described as a 'bead on a string'.  Chromatin organization strengthens DNA for mechanically stressful processes like mitosis, helps protect DNA from damage and is important in the control of gene expression and DNA replication.  "
      }
    ], 
    "skos:inScheme": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/"
      }
    ], 
    "skos:narrower": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/chromatin-structure"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/nucleosomes"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/histone-post-translational-modifications"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/chromatin-remodelling"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/histone-variants"
      }
    ], 
    "skos:prefLabel": [
      {
        "@language": "en", 
        "@value": "Chromatin"
      }
    ], 
    "type": [
      "http://www.w3.org/2004/02/skos/core#Concept", 
      "http://ns.nature.com/terms/Subject"
    ]
  }, 
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "id": "http://www.w3.org/2004/02/skos/core#Concept", 
    "rdfs:subClassOf": [
      {
        "id": "http://www.w3.org/2004/02/skos/core#Concept"
      }, 
      {
        "id": "http://www.w3.org/2000/01/rdf-schema#Resource"
      }
    ], 
    "sdDataset": "for_codes", 
    "type": [
      "http://www.w3.org/2000/01/rdf-schema#Resource", 
      "http://www.w3.org/2000/01/rdf-schema#Class"
    ]
  }, 
  {
    "@context": "https://springernature.github.io/scigraph/jsonld/sgcontext.json", 
    "dcterms:description": [
      {
        "@language": "en", 
        "@value": "The Nature Subjects Taxonomy is a polyhierarchical categorization of scholarly subject areas which are used for the indexing of content by Springer Nature."
      }
    ], 
    "dcterms:title": [
      {
        "@language": "en", 
        "@value": "Nature Subjects Taxonomy"
      }
    ], 
    "id": "http://scigraph.springernature.com/ontologies/subjects/", 
    "sdDataset": "onto_subjects", 
    "skos:hasTopConcept": [
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/physical-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/DEPRECATED"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/business-and-commerce"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/humanities"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/social-science"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/health-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/scientific-community-and-society"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/earth-and-environmental-sciences"
      }, 
      {
        "id": "http://scigraph.springernature.com/ontologies/subjects/biological-sciences"
      }
    ], 
    "type": [
      "http://www.w3.org/2004/02/skos/core#ConceptScheme"
    ]
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/ontologies/subjects/chromatin-remodelling'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/ontologies/subjects/chromatin-remodelling'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/ontologies/subjects/chromatin-remodelling'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/ontologies/subjects/chromatin-remodelling'


 

This table displays all metadata directly associated to this object as RDF triples.

48 TRIPLES      9 PREDICATES      16 URIs      10 LITERALS

Subject Predicate Object
1 sg:ontologies/subjects/chromatin-remodelling sgo:license sg:explorer/license/
2 sgo:sdDataset onto_subjects
3 rdf:type npg:Subject
4 skos:Concept
5 rdfs:label Chromatin remodelling
6 skos:altLabel Chromatin Assembly
7 Chromatin Assembly and Disassembly
8 Chromatin Disassemblies
9 Chromatin Disassembly
10 Chromatin Modeling
11 Chromatin Remodeling
12 skos:broader sg:ontologies/subjects/chromatin
13 skos:definition Chromatin remodelling is the process by which the DNA wrapped within nucleosomes becomes accessible to regulatory elements, such as transcription factors and the replication machinery. Chromatin remodelling can result from covalent modification of histones by histone acetyltransferases, histone deacetylases, histone methyltransferases or kinases, and by ATP-dependent protein complexes that physically remodel, move or remove nucleosomes.
14 skos:inScheme sg:ontologies/subjects/
15 skos:prefLabel Chromatin remodelling
16 sg:ontologies/subjects/ dcterms:description The Nature Subjects Taxonomy is a polyhierarchical categorization of scholarly subject areas which are used for the indexing of content by Springer Nature.
17 dcterms:title Nature Subjects Taxonomy
18 sgo:sdDataset onto_subjects
19 rdf:type skos:ConceptScheme
20 skos:hasTopConcept sg:ontologies/subjects/DEPRECATED
21 sg:ontologies/subjects/biological-sciences
22 sg:ontologies/subjects/business-and-commerce
23 sg:ontologies/subjects/earth-and-environmental-sciences
24 sg:ontologies/subjects/health-sciences
25 sg:ontologies/subjects/humanities
26 sg:ontologies/subjects/physical-sciences
27 sg:ontologies/subjects/scientific-community-and-society
28 sg:ontologies/subjects/social-science
29 sg:ontologies/subjects/chromatin sgo:sdDataset onto_subjects
30 rdf:type npg:Subject
31 skos:Concept
32 rdfs:label Chromatin
33 skos:altLabel Chromatins
34 skos:broader sg:ontologies/subjects/molecular-biology
35 sg:ontologies/subjects/proteins
36 skos:definition Chromatin is a flexibly joined chain of nucleosomes that exists inside the nucleus of eukaryotic cells and has been described as a 'bead on a string'. Chromatin organization strengthens DNA for mechanically stressful processes like mitosis, helps protect DNA from damage and is important in the control of gene expression and DNA replication.
37 skos:inScheme sg:ontologies/subjects/
38 skos:narrower sg:ontologies/subjects/chromatin-remodelling
39 sg:ontologies/subjects/chromatin-structure
40 sg:ontologies/subjects/histone-post-translational-modifications
41 sg:ontologies/subjects/histone-variants
42 sg:ontologies/subjects/nucleosomes
43 skos:prefLabel Chromatin
44 skos:Concept sgo:sdDataset for_codes
45 rdf:type rdfs:Class
46 rdfs:Resource
47 rdfs:subClassOf rdfs:Resource
48 skos:Concept
 




Preview window. Press ESC to close (or click here)


...