Chromatin immunoprecipitation


Ontology type: npg:Subject  | skos:Concept     


Concept Info

NAME

Chromatin immunoprecipitation

DESCRIPTION

Chromatin immunoprecipitation (ChIP) is a technique for identifying DNA sequences associated with specific proteins in vivo. The association of DNA fragments with a binding protein, such as a transcription factor or modified histone, can be assessed by sequencing, microarrays or PCR after precipitation with an antibody that recognizes the protein.

Broader Concepts

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Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/ontologies/subjects/chromatin-immunoprecipitation'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/ontologies/subjects/chromatin-immunoprecipitation'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/ontologies/subjects/chromatin-immunoprecipitation'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/ontologies/subjects/chromatin-immunoprecipitation'


 

This table displays all metadata directly associated to this object as RDF triples.

46 TRIPLES      9 PREDICATES      13 URIs      7 LITERALS

Subject Predicate Object
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2 sgo:sdDataset onto_subjects
3 rdf:type npg:Subject
4 skos:Concept
5 rdfs:label Chromatin immunoprecipitation
6 skos:altLabel ChIP
7 ChIP-Seq
8 ChIP-chip
9 skos:broader sg:ontologies/subjects/genomic-analysis
10 skos:definition Chromatin immunoprecipitation (ChIP) is a technique for identifying DNA sequences associated with specific proteins in vivo. The association of DNA fragments with a binding protein, such as a transcription factor or modified histone, can be assessed by sequencing, microarrays or PCR after precipitation with an antibody that recognizes the protein.
11 skos:inScheme sg:ontologies/subjects/
12 skos:prefLabel Chromatin immunoprecipitation
13 sg:ontologies/subjects/ dcterms:description The Nature Subjects Taxonomy is a polyhierarchical categorization of scholarly subject areas which are used for the indexing of content by Springer Nature.
14 dcterms:title Nature Subjects Taxonomy
15 sgo:sdDataset onto_subjects
16 rdf:type skos:ConceptScheme
17 skos:hasTopConcept sg:ontologies/subjects/DEPRECATED
18 sg:ontologies/subjects/biological-sciences
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26 sg:ontologies/subjects/genomic-analysis sgo:sdDataset onto_subjects
27 rdf:type npg:Subject
28 skos:Concept
29 rdfs:label Genomic analysis
30 skos:broader sg:ontologies/subjects/biological-techniques
31 skos:definition Genomic analysis is the identification, measurement or comparison of genomic features such as DNA sequence, structural variation, gene expression, or regulatory and functional element annotation at a genomic scale. Methods for genomic analysis typically require high-throughput sequencing or microarray hybridization and bioinformatics.
32 skos:inScheme sg:ontologies/subjects/
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42 skos:Concept sgo:sdDataset for_codes
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