Biological General Repository for Interaction Datasets View Homepage


Ontology type: skos:Concept     


Concept Info

NAME

Biological General Repository for Interaction Datasets

DESCRIPTION

BioGRID is an interaction repository with data compiled through comprehensive curation efforts. BioGRID currently holds over 980,000 interactions curated from both high-throughput datasets and individual focused studies, as derived from over 55,000 publications in the primary literature. Complete coverage of the entire literature is maintained for budding year (S. cerevisiae), fission yeast (S. pome), and thale cress (A. thaliana), and efforts to expand curation across multiple metazoan species are underway. All data are freely provided via the search index and available for download in standardized formats.

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Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/ontologies/data-repositories/9'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/ontologies/data-repositories/9'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/ontologies/data-repositories/9'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/ontologies/data-repositories/9'


 

This table displays all metadata directly associated to this object as RDF triples.

217 TRIPLES      12 PREDICATES      14 URIs      5 LITERALS

Subject Predicate Object
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8 rdf:type skos:Concept
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11 skos:definition BioGRID is an interaction repository with data compiled through comprehensive curation efforts. BioGRID currently holds over 980,000 interactions curated from both high-throughput datasets and individual focused studies, as derived from over 55,000 publications in the primary literature. Complete coverage of the entire literature is maintained for budding year (S. cerevisiae), fission yeast (S. pome), and thale cress (A. thaliana), and efforts to expand curation across multiple metazoan species are underway. All data are freely provided via the search index and available for download in standardized formats.
12 skos:inScheme sg:ontologies/data-repositories/
13 skos:prefLabel Biological General Repository for Interaction Datasets
14 skos:topConceptOf sg:ontologies/data-repositories/
15 sg:ontologies/data-repositories/ dcterms:description The Data Repositories taxonomy is a categorization of research data repositories that have been evaluated by the Scientific Data team as being suitable for archiving research data in conjunction with a Springer Nature publication.
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190 sg:ontologies/subjects/neurogenesis
191 sg:ontologies/subjects/neuroimmunology
192 sg:ontologies/subjects/neuronal-physiology
193 sg:ontologies/subjects/neurotrophic-factors
194 sg:ontologies/subjects/oculomotor-system
195 sg:ontologies/subjects/olfactory-system
196 sg:ontologies/subjects/peripheral-nervous-system
197 sg:ontologies/subjects/regeneration-and-repair-in-the-nervous-system
198 sg:ontologies/subjects/reward
199 sg:ontologies/subjects/sensorimotor-processing
200 sg:ontologies/subjects/sensory-processing
201 sg:ontologies/subjects/sexual-behaviour
202 sg:ontologies/subjects/social-behaviour
203 sg:ontologies/subjects/social-neuroscience
204 sg:ontologies/subjects/somatosensory-system
205 sg:ontologies/subjects/spine-regulation-and-structure
206 sg:ontologies/subjects/stem-cells-in-the-nervous-system
207 sg:ontologies/subjects/stress-and-resilience
208 sg:ontologies/subjects/synaptic-plasticity
209 sg:ontologies/subjects/synaptic-transmission
210 sg:ontologies/subjects/transporters-in-the-nervous-system
211 sg:ontologies/subjects/visual-system
212 skos:prefLabel Neuroscience
213 skos:Concept sgo:sdDataset for_codes
214 rdf:type rdfs:Class
215 rdfs:Resource
216 rdfs:subClassOf rdfs:Resource
217 skos:Concept
 




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