NCBI Trace Archive View Homepage


Ontology type: skos:Concept     


Concept Info

NAME

NCBI Trace Archive

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    ], 
    "type": [
      "http://www.w3.org/2004/02/skos/core#ConceptScheme"
    ]
  }
]
 

Download the RDF metadata as:  json-ld nt turtle xml License info

HOW TO GET THIS DATA PROGRAMMATICALLY:

JSON-LD is a popular format for linked data which is fully compatible with JSON.

curl -H 'Accept: application/ld+json' 'https://scigraph.springernature.com/ontologies/data-repositories/78'

N-Triples is a line-based linked data format ideal for batch operations.

curl -H 'Accept: application/n-triples' 'https://scigraph.springernature.com/ontologies/data-repositories/78'

Turtle is a human-readable linked data format.

curl -H 'Accept: text/turtle' 'https://scigraph.springernature.com/ontologies/data-repositories/78'

RDF/XML is a standard XML format for linked data.

curl -H 'Accept: application/rdf+xml' 'https://scigraph.springernature.com/ontologies/data-repositories/78'


 

This table displays all metadata directly associated to this object as RDF triples.

165 TRIPLES      10 PREDICATES      12 URIs      4 LITERALS

Subject Predicate Object
1 sg:ontologies/data-repositories/78 schema:about sg:ontologies/subjects/dna-sequencing
2 sg:ontologies/subjects/next-generation-sequencing
3 sg:ontologies/subjects/rna-sequencing
4 schema:sameAs https://www.biosharing.org/biodbcore-000636
5 schema:url http://www.ncbi.nlm.nih.gov/Traces/home/
6 sgo:license sg:explorer/license/
7 sgo:sdDataset onto_dr
8 rdf:type skos:Concept
9 rdfs:label NCBI Trace Archive
10 skos:inScheme sg:ontologies/data-repositories/
11 skos:prefLabel NCBI Trace Archive
12 skos:topConceptOf sg:ontologies/data-repositories/
13 sg:ontologies/data-repositories/ dcterms:description The Data Repositories taxonomy is a categorization of research data repositories that have been evaluated by the Scientific Data team as being suitable for archiving research data in conjunction with a Springer Nature publication.
14 dcterms:title Data Repositories Taxonomy
15 sgo:sdDataset onto_dr
16 rdf:type skos:ConceptScheme
17 owl:versionInfo 0.0.5
18 skos:hasTopConcept sg:ontologies/data-repositories/1
19 sg:ontologies/data-repositories/10
20 sg:ontologies/data-repositories/100
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129 sg:ontologies/subjects/dna-sequencing sgo:sdDataset onto_subjects
130 rdf:type npg:Subject
131 skos:Concept
132 rdfs:label DNA sequencing
133 skos:altLabel DNA Sequence Analyses
134 DNA Sequence Analysis
135 DNA Sequence Determination
136 DNA Sequence Determinations
137 skos:broader sg:ontologies/subjects/sequencing
138 skos:definition DNA sequencing is any chemical, enzymatic or technological procedure for determining the linear order of nucleotide bases in DNA. Sanger sequencing by replicative synthesis in the presence of dideoxy nucleotide chain terminator monomers has now given way to 'next generation' sequencing by short parallel read technologies. The term often applies to the entire sequence determination pipeline including post-sequencing software analysis.
139 skos:inScheme sg:ontologies/subjects/
140 skos:prefLabel DNA sequencing
141 sg:ontologies/subjects/next-generation-sequencing sgo:sdDataset onto_subjects
142 rdf:type npg:Subject
143 skos:Concept
144 rdfs:label Next-generation sequencing
145 skos:broader sg:ontologies/subjects/sequencing
146 skos:definition Next-generation sequencing refers to non-Sanger-based high-throughput DNA sequencing technologies. Millions or billions of DNA strands can be sequenced in parallel, yielding substantially more throughput and minimizing the need for the fragment-cloning methods that are often used in Sanger sequencing of genomes.
147 skos:inScheme sg:ontologies/subjects/
148 skos:prefLabel Next-generation sequencing
149 sg:ontologies/subjects/rna-sequencing sgo:sdDataset onto_subjects
150 rdf:type npg:Subject
151 skos:Concept
152 rdfs:label RNA sequencing
153 skos:altLabel RNA Sequence Analyses
154 RNA Sequence Analysis
155 RNA Sequence Determination
156 RNA Sequence Determinations
157 skos:broader sg:ontologies/subjects/sequencing
158 skos:definition RNA sequencing refers to techniques used to determine the sequence of RNA molecules. It includes high-throughput shotgun sequencing of cDNA molecules obtained by reverse transcription from RNA, and next-generation sequencing technologies to sequence the RNA molecules within a biological sample in an effort to determine the primary sequence and relative abundance of each RNA molecule.
159 skos:inScheme sg:ontologies/subjects/
160 skos:prefLabel RNA sequencing
161 skos:Concept sgo:sdDataset for_codes
162 rdf:type rdfs:Class
163 rdfs:Resource
164 rdfs:subClassOf rdfs:Resource
165 skos:Concept
 




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